Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01260 ATGGCGGCGTGCGCGACTGACTTATCTCGAGCGGCTTCGTGCCGTAACGGCGCGGCGGCGGCTCACCTGAAACTGATATCAATGTTCATCATCTTCTTCACCAGCGCTGCCGGCATGTCATCGCCGGTGATCCTCGCCCGTATTTTCAGGGGAAAACCGTTATACGACAGAGCGTTAGTAATTATCAAGTGCTTCGCGGCGGGTGTAATCCTCTCCACCTCACTCGTCCACGTGCTCCCTGACGCGTACGCTTCACTCGCGGACTGCCACGTGGCAACACGCCACCCTTGGAAGGATTTTCCCTTCGCTGGGCTCGTTACCCTTGTGGGGTCCCTTATGGCACTATTGGTTGACCTCGTTGCAAGTTCACACGTGGAACACGCGCAGTACGCGCCGGTGGTTTCGCCGGAGAAGGAGTCCGCCGTCGAACTCGGCGGTGGCGGTGGCGGTGACGGCGAAGGTGATAGGAGTGAAGAGTTGATTAGGTTAAAACAGAGGCTGGTTTCTCAAGTGTTGGAGATTGGGATAATTTTTCACTCAGTGATAATTGGTGTTACTATGGGAATGTCTCAGAACGTTTGCACTATTAGACCTCTCGTTGCTGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTTGGTGGTTGCGTCGCTCAGGCAGGATTCAGCTTTGGAACAATGGCATACATGTGCTTCATGTTCTCAGTGACAACACCATTGGGGATAATTTTGGGGATGGCATTATTCTCATTGACAGGTTATGATGATAGTAGCCCAAATGCCTTGATCATGGAAGGGTTACTAGGTTCAATTTCTTCAGGAATACTGATTTACATGGCCCTCGTTGACCTCATAGCAGTTGATTTCTTTCACAACAAGCTCATGAACTCTGATTCTCGGTTGAAAAAGGCATCTTTTGTTGCCTTAACCCTTGGTTCTGCTGCAATGTCTATTCTCGCCCTCTGGGCTTGA 975 0.5056 MAACATDLSRAASCRNGAAAAHLKLISMFIIFFTSAAGMSSPVILARIFRGKPLYDRALVIIKCFAAGVILSTSLVHVLPDAYASLADCHVATRHPWKDFPFAGLVTLVGSLMALLVDLVASSHVEHAQYAPVVSPEKESAVELGGGGGGDGEGDRSEELIRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTMAYMCFMFSVTTPLGIILGMALFSLTGYDDSSPNALIMEGLLGSISSGILIYMALVDLIAVDFFHNKLMNSDSRLKKASFVALTLGSAAMSILALWA* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01260 324 PANTHER ZINC/IRON TRANSPORTER 20 318 - -
Rops9g01260 324 Pfam ZIP Zinc transporter 162 321 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops9g01260 324 Pfam ZIP Zinc transporter 22 140 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops9g01260 324 NCBIfam ZIP zinc/iron transport family 10 324 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01260 Rops-Chr9 20921233 20925440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01260 1 324 Inorganic Solute Cotransporters AT2G30080 65.015 5.10e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01260 K14709 - gmx:100797310 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01260 9 20921233 20925440 Rops9g01260 9 20921233 20925440 ECH
Rops11g02391 11 40569998 40571578 Rops9g01260 9 20921233 20925440 ECH
Rops11g02391 11 40569998 40571578 Rops9g01260 9 20921233 20925440 PCT