Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01258 ATGGCAGAAATGGAAACGTTAGTTAAACAAGGGTTCGCATGCTTCACCACTCGTGTGGATAATCCCAACCCTGTGTGGAACAGTGAAAATGTCCTACAAGGAAACCTTCCTGATCTTGTCAACCAACTTTTCTTGGTTGTCTTTACCATTCGTTTTTTTTACTTAATCTTCAGACCCTTCCATCAACCTCATTTTGTTGCTGAGATTCTTGCGGCTCTCTTGCTAAATATAGAAGTACATGGACAATTGTTTCTTCCAGGACTCGTAGGTCCAAAGCAAGCCCTTACTGTGGAAACCTTGGCACATGTGGGTCTCATCTATTATGTCTTCATCAATGGCTTGGAGATGAACTTGGAAACTGTCCTACGAGCAAGAAAGAAGGCAACAACCATTGCTGTTGCTGGCACCTTAATTCCAATGGCATTGGGAGCTGGAATATATTTCTTGTTTCAGAATTTCAGTGTTATCCATGATCAACTTTCACATTTCAATGGACCTGAAGCTTATATAATGTGGACCTTAGTTGTTAGTGTCACAAGTTTTCCCATCTTGGCTCACATCCTTGTGGACCTAAAGATCCTCTACACTGGGATTGGTAGAGTGGCATTAACATCATCTACTATTAATGACTTCTATAATAGGGCTATGTTTGTGCTCTTGGTTCCATTGGCTGTTAATGGTACAAAAGGCTTTTACTCATTGATGGGCACCATAGTTTTTATCCTTTTATGCTTCTTTGTGCTACGCCCTTCCCTCATGAGGCTATTAATCCTAAAGACCAATCAGAATGAAAAGGACAATTACCTGTTATCATATCTTATCATTGGTGTCTTTGCCTGTGCCACTATTACTGAATTTCTTGGTACAAACTCTGTTGTTGAGCCTTTGGTGTATGGATTGATCCTTCCTTGTGGAAGATTCACTGACATGTTGATAGAGAAGTCAGATGATATTGCATCTGGCTGCATGAAGATTGTGAGCACTATAATAGCCACTCACTTCTATGGAATGCCTCTCCAAGATAGCATGGCTCTTGGAGTGCTTATGAACACCAAAGGCGTCTTACCATTCATAATACTAAACATTGCATGGAATAAAAAGATTTTGAGTCACAAGGCCTTTACAATTTTGGTGTACAATATTCTTGTTATGACTGCGATAGTGTCTCCTATCATCAATGGCATTTATAGGCCAAGAAATCGACATGAGCAAAATAAGCTAAGGACAATAGAGAAATTGAAGGTTGATTCAAAGATCAGAGTTATGGTTTGTGTACTCAATGCTCGCCATGCCAGTGGAATGATCAACATCCTTGGAGCTTGCAATGGCACTAACATTTCCCCTTTACGTGTTTTTGCTCTTCAACTTGTTGAGCTCAAAGGACGTGCCACTGCCCTTCTAGTTTCCCACATAGAGCAATCCACTTCCCAAAAGTGTGGAACACATGAAGTTACCAACCCATCAGAATCAAGCTTGGAAAGCATCACTGACATTTTTGTAGATTATGCATCTAACCATGAACACACAATTGTGGAGAGCCTTATTGCTATGTCATCCTAG 1560 0.4045 MAEMETLVKQGFACFTTRVDNPNPVWNSENVLQGNLPDLVNQLFLVVFTIRFFYLIFRPFHQPHFVAEILAALLLNIEVHGQLFLPGLVGPKQALTVETLAHVGLIYYVFINGLEMNLETVLRARKKATTIAVAGTLIPMALGAGIYFLFQNFSVIHDQLSHFNGPEAYIMWTLVVSVTSFPILAHILVDLKILYTGIGRVALTSSTINDFYNRAMFVLLVPLAVNGTKGFYSLMGTIVFILLCFFVLRPSLMRLLILKTNQNEKDNYLLSYLIIGVFACATITEFLGTNSVVEPLVYGLILPCGRFTDMLIEKSDDIASGCMKIVSTIIATHFYGMPLQDSMALGVLMNTKGVLPFIILNIAWNKKILSHKAFTILVYNILVMTAIVSPIINGIYRPRNRHEQNKLRTIEKLKVDSKIRVMVCVLNARHASGMINILGACNGTNISPLRVFALQLVELKGRATALLVSHIEQSTSQKCGTHEVTNPSESSLESITDIFVDYASNHEHTIVESLIAMSS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01258 519 Gene3D - 321 406 IPR038770 -
Rops9g01258 519 Gene3D - 38 320 IPR038770 -
Rops9g01258 519 PANTHER CATION/H + ANTIPORTER 25 322 - -
Rops9g01258 519 Pfam Sodium/hydrogen exchanger family 44 320 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01258 Rops-Chr9 20882000 20884552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01258 14 518 Antiporter Super Family AT2G13620 33.029 7.22e-83 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01258 - K26731 mtr:11442852 544.273