Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01250 ATGGCTGCAGCCTTGGAGTGTTGGTCTAGTCGCACAGGCACCGAAGATGATACAGTGGAACAAGTCCTCATGAGGACCCACCACAGATCCGAAACTCTTCCTTCTTCTTCTTCTTCATCAACTAAAGAATCCTCCACCCCAGTTCAGAAAAAGTTGCAGAAGCTGAGTCGTAACCTCTCTGATGCTATAACCTCTTTCAAGAACTCCCTTAACCTCAACAATGATCCTCAACCTTCTTCAAAGAAACTTGCTTGGGCTACCATTCTCCGTAACCTTACTCATCTCTATCCTGGAACACAGCTTCCTGATAACCTCCTATCCAATGTTCGTAACCATTACCATTCCCTTCCTCTCAGTTATGCGCAAGCTGAATTTGATATGAAGGACGTGTTTCTTCACATCAAGTTGATGGAACAGGCATTGGAGAGTGACCAACCTGCTATTTTGATTCAAGAAGATTCTGATGATGTTGGTGAGGTTAAAGGGTCTGTTTTGAGGCTCACCTTTGCTTGCAACTCTACGATTTCTTGGCCTGCAATGTCTGGGATGTTGGATAGTTTTTCCATTCGCTGCAAGAGGATTCAGATCTTTGAGAAGAAAGGTTTCACCTTGGGGGTTGTTCTTCTTGTTGTTCGATCTAGGCATGATAAATTGGTTAAGAACCGGGTTGAAAATGCTTTGAAGTTTGCTATGAAGAAGCCTAGAACTGGTGCTGTGAATGTGAAGCTTCCCTTTGGACTCTGTGGATGTCAAGAAGAGAATTTCAAGGGAAGAGAATTAGGGGAAATTGAAGAAGATAGTGGTGGTGGTGGTGGTGATGCATGGCGTGGAAAAGAGTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGGTGCCTTTGCCCAATTCATCTTTCATTGTATCAGTGGATGAATGGCAGACTATAAAGTCAGGTGGTGATGAGATTGAGAAATGGTTGTTGAATGCAGATAGTGTTGAGTTTACTGAACAGGTTGGACCTAATTCTTTTAAGGGTGTCTACATGGGGAAAAGGGTTGGAATTGAGAAGTTGAAAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTACACAAAGATCTGCTTGAATTGATGACTTGTGGACATAGAAACATTCTGCCGTTCTGCGGTATTTGTATTGATGATAATCATGGGTTATGTGTGGTGACTAAGTTCATGGAAGGTGGGTCTGTTCATGACTTAATGCTAAAGAACAAGAAACTTCAGAATAAGGATATTGTGAGAATTGCAATTGATGTAGCTGAGGGAATCAAGTTTATGAATGACCATGGTGTTGCATACAGAGACCTTAATACACAGAGGATTCTATTGGATAAGCATGGGAATGCTTGTTTGGGAGATGTGGGTATAGTCAATGCATGCCAGAATGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCAGAGATAATTGCAGGGGACCCTGAGAGTGTCACAGAAACTTGGATGAGTAATGTTTATAGTTTTGGGATGATAATTTGGGAGATGGTAACTGGTGAGGCAGCCTATTCTGCGTTTTCACCTGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTTAGACCTGAAATCCCCAAGGACTGTTCACAAAATCTAAAATATATTATGACAAAGTGTTGGAACAACACCCCTTCAAAACGTCCTCAGTTATCTGAAATTTTAGCCATATTGCTGCGACCAAACAACAACAATAGGTAA 1752 0.4224 MAAALECWSSRTGTEDDTVEQVLMRTHHRSETLPSSSSSSTKESSTPVQKKLQKLSRNLSDAITSFKNSLNLNNDPQPSSKKLAWATILRNLTHLYPGTQLPDNLLSNVRNHYHSLPLSYAQAEFDMKDVFLHIKLMEQALESDQPAILIQEDSDDVGEVKGSVLRLTFACNSTISWPAMSGMLDSFSIRCKRIQIFEKKGFTLGVVLLVVRSRHDKLVKNRVENALKFAMKKPRTGAVNVKLPFGLCGCQEENFKGRELGEIEEDSGGGGGDAWRGKEFENSSQKIQLQVPLPNSSFIVSVDEWQTIKSGGDEIEKWLLNADSVEFTEQVGPNSFKGVYMGKRVGIEKLKGCEKGNSYEFELHKDLLELMTCGHRNILPFCGICIDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAIDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLGDVGIVNACQNVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMIIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCSQNLKYIMTKCWNNTPSKRPQLSEILAILLRPNNNNR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01250 583 ProSiteProfiles Protein kinase domain profile. 325 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01250 583 MobiDBLite consensus disorder prediction 25 53 - -
Rops9g01250 583 Gene3D Transferase(Phosphotransferase) domain 1 318 579 - -
Rops9g01250 583 Pfam Protein tyrosine and serine/threonine kinase 359 574 IPR001245 GO:0004672|GO:0006468
Rops9g01250 583 SUPERFAMILY Protein kinase-like (PK-like) 305 575 IPR011009 -
Rops9g01250 583 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 575 - -
Rops9g01250 583 MobiDBLite consensus disorder prediction 28 53 - -
Rops9g01250 583 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Rops9g01250 583 PRINTS Tyrosine kinase catalytic domain signature 546 568 IPR001245 GO:0004672|GO:0006468
Rops9g01250 583 PRINTS Tyrosine kinase catalytic domain signature 396 409 IPR001245 GO:0004672|GO:0006468
Rops9g01250 583 PRINTS Tyrosine kinase catalytic domain signature 432 450 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01250 Rops-Chr9 20716380 20720583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01250 308 575 MAP Kinase Kinase Kinase AT2G17700 32.000 3.06e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Rops9g01250 PK_Tyr_Ser-Thr 2.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01250 - - pvu:PHAVU_008G258400g 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01250 9 20716380 20720583 Rops9g01250 9 20716380 20720583 ECH
Rops11g02369 11 39858210 39861796 Rops9g01250 9 20716380 20720583 PCT