Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01245 ATGGCTGAGGCCTTACTTGGAGTTGTGTTTGAGAATTTGCTCTCTTTGGTTCAAAATGAATTTGCAACCATGTCTGGAATAAAGGGAAAAATTGAAAAGCTATCAACCACTTTAGATATGATCAAGGCCGTCCTTGAAGATGCTGAGGAGAAACAATTAACAAACCGCTCTATTCAGGTTTGGGTGCAGCAACTCAAAGATGCAGTATATGTGCTAGATGATATCCTTGATGAATGTTCCATGGAATCCGGTCAACTTGGGGGCATATCCTCTTTCAAACCAAAGAACATCTTGTTTCGTTATAGGATTGGCAACGAGTTGAAAGAGATTACAAGGAGGTTTGACCAAATTGCGGAAGACAAAAACAAGTTTCTTCTACGAGAGGGTGGTAGGGAAAGGTCAAGTGAGCTGGGAGAATGGCGCCAAACCAGCTCAATTATTCAGCAACCTCAAGTATATGGACGAGATGATGATAAAGAGAAGATTGTGGAGTTTCTTCTTCACCAAGCACCAAGCTCTGACTTCCTTTTCGTCTATCCCATAGTTGGCTTAGGTGGAGTTGGAAAAACAACACTTGCTCAATTGGTCTACAATGATGAAAGAGTAAGTAATAATTTTAACCTAAAAATTTGGGTTTGTGTTTCTGAGAATTTCTCTATCAAGAAGATTTTGTGCTCTATTATAGAATCAATCACAAGAGAAAGATATGATGCCTTGAATTTAGATATAACAGAAAGAAAAGTACAAGAATTGTTGCAAAGTAAAAGGTATTTGCTGGTCTTAGATGATGTGTGGAAAACAAATCAACAATTGGAATTTGGGTTAAGCCAAGACAAATGGAATAAGTTGAAATCTGTGTTGTCATGTGGATCCAAAGGTGCTTCCATTTTAGTATCCACTCGTGAAAAGGATGTCGCAGCAATCATGGGAACACGCCAAGTTCATCATTTGGCTGGTTTATCTGAGGATCAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACCTGACAAAGAAGAACGTGCAGAACTTATAGCATTAGGCAAGGAGATAGTCAAGAAGGGTGGTGGATCACCTCTTGCAGCACAAGCATTAGGAGGTCTAATGCGCTCAAGGTGTGGGGAAAAGGAATGGCTTGAAGTTAAGGAAAGTAGGTTATGGACTTTACCTGATGAGAATTCTATTTTGCCTGCCTTGAGGTTGAGCTACATTCATTTAACACCAACCTTAAAGCAGTGTTTTGCTTTTTGTGCCATATTTCCCAAAGATTCAACAATCAAGAAGGAAGATTTGATTCATCTTTGGATGGCTAATGGGTTTATTTCATCAAGGGCAAACTTAGAGGTAGAAGATGTTGGCAACATGATTTGGAATGAATTGTACCAAAGATCATTCTTCCAAGATCTTGAGATCAATAATAAAGGAGACATTTCTTTCAAGATGCACGATCTTGTTCATGATCTTGCTCAGTCAGTTATGGGGCCAGAGTGTATGATTTTAGAGAATGCAAACATAGCTGATTTGTCAAGAAGCACACACCATATTGGTTTTAGCTATCATGTATTTCTCAAAAAGGAAGCCTTAGAGAAAGTTGCATTCTTGCGAACATTATATCAATCGGAATTAGTATATGGTGGTGAGACAATTCATGCTTGGTTTCCAAAAAAATGTTCTCTCCGAGTTTTACGCACAAATTCTTTCAAGTTATCATCACTAGGGAATTTAATTCATTTGAGGTATCTAGAGCTGTCTAATTTTGACATAGAAACTTTCCCTAACTCAATTTATAACTTGCGGAAATTAGAAATCTTGAAACTGAAAGAATTTCATAATCTTAGTTGTCTACCGAAACACTTGACTTGCTTACAGAATCTCAGGCACCTTGTCATTGAAGGTTGTGATTCACTGTCTTGTATGTTCCCTGATATCCGAAAATTATCTTGCCTAAGAACATTAAGTGTCTACATTGTTAGTTTAGAGACAGGACATGGCTTGGCAGAGTTACGTGATCTAAAATTGAGAGGAAAACTAAGGATCAAAGGCCTAGAAAACGTTGGCAGTTTATCTGAAGCTCAAGAGGCCAATTTGATGGGCAAAAATGACCTCCAGGAATTATGCTTGTCATGGGCCAAAGGAGGTAAAACCAAGTCACATGTTGAGCAAGTACTTGAAGCGCTTCAACCTCACTCAAATCTCAAGACATTGAAAATACATAATTATGAAGGAGGAAAATTCTCAAGCTGGATCGGAATTCTAAGTAGTTTAGTTGTTCTTGAACTTCATAAATGCAGAGACTGCAGACAGCTTCCATCACTTGGTAAACTACCATCTCTAAGAAAACTTGTAATATGGGTTATGACAAGTGTACAGTACATTGATGACGATGAATCTTATGATGGCGTGGAGGTGAAGGCTTTCCCATCTTTAGAGGAACTTGTTTTAATAGGGTTACCAATGTTAGAACGGCTGTTGAAAGTGGAAAGAGGGGAGATGTTCCCCAATCTTTCTATTTTGTTTATCGACAGTTGCCCTAAACTTGGGTTACCATGTCTTCCATCTATTAAAAGCCTTCGTGTGGATGGATGCAACAATGAGTTACTGAGGTCAATCTCTAGTTTCTATAGTCTCACTTCCCTTGACCTTTCTGGAGGTGAAAACCTAAAATCCTTCCCAGAGGGAATGATGATAACCCTGACTTGTCTTGAAACTCTGAGAATATCTGGTTTCCCAAAATTGAATGAATTACCAAATGAACTCTTCAACCTCAACACTTTGAAAGAACTGCAAATCATGTTTTGTTGGGATCTTGAGTCTTTACCAGATCAGGTTTGGGAAGCCACATTTCCACCCAATCTGGATATTGCAGTCTTGACTCTTGTCTCTTCACCGGAAGTCTCATAA 2901 0.3864 MAEALLGVVFENLLSLVQNEFATMSGIKGKIEKLSTTLDMIKAVLEDAEEKQLTNRSIQVWVQQLKDAVYVLDDILDECSMESGQLGGISSFKPKNILFRYRIGNELKEITRRFDQIAEDKNKFLLREGGRERSSELGEWRQTSSIIQQPQVYGRDDDKEKIVEFLLHQAPSSDFLFVYPIVGLGGVGKTTLAQLVYNDERVSNNFNLKIWVCVSENFSIKKILCSIIESITRERYDALNLDITERKVQELLQSKRYLLVLDDVWKTNQQLEFGLSQDKWNKLKSVLSCGSKGASILVSTREKDVAAIMGTRQVHHLAGLSEDQCWLLFKQYAFGPDKEERAELIALGKEIVKKGGGSPLAAQALGGLMRSRCGEKEWLEVKESRLWTLPDENSILPALRLSYIHLTPTLKQCFAFCAIFPKDSTIKKEDLIHLWMANGFISSRANLEVEDVGNMIWNELYQRSFFQDLEINNKGDISFKMHDLVHDLAQSVMGPECMILENANIADLSRSTHHIGFSYHVFLKKEALEKVAFLRTLYQSELVYGGETIHAWFPKKCSLRVLRTNSFKLSSLGNLIHLRYLELSNFDIETFPNSIYNLRKLEILKLKEFHNLSCLPKHLTCLQNLRHLVIEGCDSLSCMFPDIRKLSCLRTLSVYIVSLETGHGLAELRDLKLRGKLRIKGLENVGSLSEAQEANLMGKNDLQELCLSWAKGGKTKSHVEQVLEALQPHSNLKTLKIHNYEGGKFSSWIGILSSLVVLELHKCRDCRQLPSLGKLPSLRKLVIWVMTSVQYIDDDESYDGVEVKAFPSLEELVLIGLPMLERLLKVERGEMFPNLSILFIDSCPKLGLPCLPSIKSLRVDGCNNELLRSISSFYSLTSLDLSGGENLKSFPEGMMITLTCLETLRISGFPKLNELPNELFNLNTLKELQIMFCWDLESLPDQVWEATFPPNLDIAVLTLVSSPEVS* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01245 966 Gene3D Ribonuclease Inhibitor 535 660 IPR032675 -
Rops9g01245 966 Gene3D - 319 401 IPR042197 -
Rops9g01245 966 FunFam Probable disease resistance protein At1g63360 403 491 - -
Rops9g01245 966 CDD RX-CC_like 2 119 IPR038005 -
Rops9g01245 966 Gene3D Ribonuclease Inhibitor 849 948 IPR032675 -
Rops9g01245 966 Gene3D Ribonuclease Inhibitor 661 848 IPR032675 -
Rops9g01245 966 PANTHER DISEASE RESISTANCE PROTEIN RP 31 820 IPR044974 GO:0006952
Rops9g01245 966 PRINTS Disease resistance protein signature 178 193 - -
Rops9g01245 966 PRINTS Disease resistance protein signature 251 265 - -
Rops9g01245 966 PRINTS Disease resistance protein signature 355 369 - -
Rops9g01245 966 PRINTS Disease resistance protein signature 871 887 - -
Rops9g01245 966 Gene3D - 402 492 IPR036388 -
Rops9g01245 966 SUPERFAMILY L domain-like 478 941 - -
Rops9g01245 966 Coils Coil 31 51 - -
Rops9g01245 966 Gene3D - 137 315 IPR027417 -
Rops9g01245 966 Gene3D - 6 117 - -
Rops9g01245 966 FunFam Probable disease resistance protein At1g61300 135 314 - -
Rops9g01245 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 417 IPR027417 -
Rops9g01245 966 Pfam Rx N-terminal domain 6 95 IPR041118 -
Rops9g01245 966 Pfam NB-ARC domain 156 383 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01245 Rops-Chr9 20588507 20595334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01245 181 816 WRKY Transcription Factor Family AT5G45050 24.063 4.17e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01245 - - mtr:11405813 1157.9