Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01244 ATGGCCGAGGCCTTACTCGGAGTCGTAATAGAGAATTTGATCCCTTTGGTTCAGAATGAACTTGCAACCATTTCTGAAATCAAGGGAAAAATTGAAAAGCTATCAAACACTTTAGATATGATCAAGGGCGTCCTTGAAGATGCTGAGGAGAAACAAATAACAAACCGCTCTATAAAGGTTTGGGTGCAGCAACTCAAAGATGCAGTGTATGTGCTAGATGATATTCTTGATGAATGTTCCATGGAATCCTGTCGACTTGGGGGCTTATCCACTTTCAAACCAAAGAACATCATGTTTCGTCGTAGGATTGGCAACAAGTTGATAGACATTACAAGGAGGTTTGATCAAATTGCTGAAGGTAAAAACAAGTTTGTTCTAAGTGAGGGTAGTAGGGAAAGATCCAGTGAAGTGGTAGAATGGCGCCAAACCAGCTCAATTATTCAGCAACCTCAAGTATATGGACGAGATGATGATAAAGAGAAGATTGTGGAGTTTCTTCTTCGCCAGGCACGGGGCTCTGACTTTCTTTCCATTTATCCCATCGTTGGCTTAGGTGGAGTTGGAAAAACAACACTTGCTCAATTGGTCTACAATGATGAAAGAGTAAGTCATCATTTCAACATAAAAATCTGGGTTTGTGTTTCTGAAAATTTCTCTATCGAGAGAATTCTATGCTCCATTATAGAATCAATCACAAGAAAAAGGCCAGATGTCTCGACTTTTGAAGCAATAGCAAGAGAAGTACAAAAGCTGTTGCAAAGTGATAGATATTTGCTGGTCTTAGATGATGTGTGGAAAGCAAATCAACAATTGGAATTTGGATTAAGTCAAGACAAATGGAATAAGTTGAAATCTGTGCTGTCACATGGATCTAAAGCTGAAGGTTCTTCAATTTTAGTATCCACTCGTGATATGGATGTTGCTGCAATCATGGGAACATGTCAAGCTCATCGTTTAGATGGTTTATCTGAGGATCAATGTTGGTTGTTGTTCAAACAATATGCATTTGGATCTGACAAAGAAGAGTGTGCAAAACTTGTAGCAATAGGCAAGGAGATAGTAAAGAAGTGTGGAGGATCACCTCTTGCAGCACAAGCATTAGGGGGTCTAATGAGTACAAGGAATGGAGAAAAGGAATGGCTTGAAGTTAAGAAAAGTAGGCTCTGGACTTTACCCGATGAGAATTCTATTTTGCCTGCCTTGAGGTTGAGTTACTTCTATTTAACACCAACCTTGAAGCAGTGTTTCGCTTTCTGTGCCATGTTTCCCAAAGATTCAGTAATCATGAAGGAAGATTTGATTCATCTTTGGATAGCTAATGGGTTTATTTCGTCAAGGGAAAACTTAGAGGTAGAAGATGTTGGCAACATGGTTTGGAATGAATTGTACCAAAAATCACTCTTCCAAGATATCATGATCAATAAAAAAGGAGACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAGTCAGTTACGGGGCCAGAATGTGTGAATTTGGAGAATGCAAACATAACTGATTTGTCAAGAAGCACACACCATATTTGTGTTGACGGTTGGACATATCTCAAAGAGGAAGCCTTGGAGAAAGTTGAATCCTTGCGAACATTCTATCAATCAGAATTAAGATTTGGTGACATTCTTGATTGTTTTCCAAAAAAGATTTCTCTCCGGGCTTTACGCATAAGTTCTTTCAAGCTATCATCACTTGAGAATTTGATTCATTTGAGGTATTTGGAGCTTTATGATTTTTGCATAGAGACCTTCCCTGACTCAATTTATAGCTTGCAAAAATTGGAAATCCTGAAACTGAAAAAAATTGATAATCTTCGTTGTTTACCAAAGCACTTATCTTGCTTACAGAATCTTAGGCATCTCATCATTGAACATTGTGATTCACTGTCTTGTATGTGCCCCCACATTCAAAAATTATCCTGTCTTAGAACATTAAGTGTATACATTGTCAGATCAGAGACAGGGCACAGCTTGGCAGAGTTACATAATCTAAAACTGGGAGGAAGACTGAGTATCGAAGGCTTAGAAAATGTTTGCAATTTATCTGAAGCTCAAGATGCCAATTTGATATGTAAAAAAGATCTGGAGGAATTATGCTTGTCATGGGACCACAAATTTGAAACTAAGTCACATACTAATGCCGAGCAAGTACTTGAAGCACTACAACCTCACCCAAATCTCAAGACATTGATAATACATAATTATGAAGGAGGAAAATTCTCGAGCTGGAATGGAATTATCAGTAGTTTAGCTGCTCTTGAACTTTATGATTGCTTAAACTGCAGGCAGCTTTCGTCACTTGGTAAACTACCTTCTCTAAGAAAACTTAAAATAAGTTTTATGACAAGGGTGCAGTGCATGGATGACGATGAATCTTACGATGGTGCGGAGATTAAGGCCTTCCCATCTTTAAAGAAACTCTCATTAAGAGGGTTATCAGAGTTAGAACGGCTATTGAAAGTGGAGAAAGGGGAGATGTTCCCTAATCTTTCTGTTTTGATTATCCAAGATTGCCCCAAGCTAGAGTTGCCATGTCTTCCATCTATTAAAAGCCTCCGTGTGTATGGATGTAATAATGTGTTACTGAGGTCAGTCTCTAGTTGCTACAATCTCACCTCCCTTAAACTTTATAGAGGTGGAAACCTGACATCCTTCCCAGAGGAAATGATAAAAAGCCTGACTTGTCTTGAGACTTTGACAATATTTGATTTCCCAAAATTAAATGAATTACCAAATGAATTCTTTAACCGCAATACTTTGGAGGAACTGATAATTGTGTCTTGTGGGGAGCTTGAGTATTTACCAGAGCAAGTCTGGGAAGGTCTACGCTCCCTTCGAAGTCTAGAGATTATTGAATGTAGAAGATTGAGATGCTTGCAAGAAGATCTTCGATACCTTACCGCTTTGAAGGAACTGAAAATCATGTATTGTGATGAGCTTGAGTCTTTACCGGAGCATGTTTGGGAAGGTCTACGCTCCCGTCAAATTCTGCATATTGTGAAATATGAAAGATGGTGA 3039 0.3866 MAEALLGVVIENLIPLVQNELATISEIKGKIEKLSNTLDMIKGVLEDAEEKQITNRSIKVWVQQLKDAVYVLDDILDECSMESCRLGGLSTFKPKNIMFRRRIGNKLIDITRRFDQIAEGKNKFVLSEGSRERSSEVVEWRQTSSIIQQPQVYGRDDDKEKIVEFLLRQARGSDFLSIYPIVGLGGVGKTTLAQLVYNDERVSHHFNIKIWVCVSENFSIERILCSIIESITRKRPDVSTFEAIAREVQKLLQSDRYLLVLDDVWKANQQLEFGLSQDKWNKLKSVLSHGSKAEGSSILVSTRDMDVAAIMGTCQAHRLDGLSEDQCWLLFKQYAFGSDKEECAKLVAIGKEIVKKCGGSPLAAQALGGLMSTRNGEKEWLEVKKSRLWTLPDENSILPALRLSYFYLTPTLKQCFAFCAMFPKDSVIMKEDLIHLWIANGFISSRENLEVEDVGNMVWNELYQKSLFQDIMINKKGDISFKMHDLVHDLAQSVTGPECVNLENANITDLSRSTHHICVDGWTYLKEEALEKVESLRTFYQSELRFGDILDCFPKKISLRALRISSFKLSSLENLIHLRYLELYDFCIETFPDSIYSLQKLEILKLKKIDNLRCLPKHLSCLQNLRHLIIEHCDSLSCMCPHIQKLSCLRTLSVYIVRSETGHSLAELHNLKLGGRLSIEGLENVCNLSEAQDANLICKKDLEELCLSWDHKFETKSHTNAEQVLEALQPHPNLKTLIIHNYEGGKFSSWNGIISSLAALELYDCLNCRQLSSLGKLPSLRKLKISFMTRVQCMDDDESYDGAEIKAFPSLKKLSLRGLSELERLLKVEKGEMFPNLSVLIIQDCPKLELPCLPSIKSLRVYGCNNVLLRSVSSCYNLTSLKLYRGGNLTSFPEEMIKSLTCLETLTIFDFPKLNELPNEFFNRNTLEELIIVSCGELEYLPEQVWEGLRSLRSLEIIECRRLRCLQEDLRYLTALKELKIMYCDELESLPEHVWEGLRSRQILHIVKYERW* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01244 1012 PRINTS Disease resistance protein signature 357 371 - -
Rops9g01244 1012 PRINTS Disease resistance protein signature 947 963 - -
Rops9g01244 1012 PRINTS Disease resistance protein signature 251 265 - -
Rops9g01244 1012 PRINTS Disease resistance protein signature 178 193 - -
Rops9g01244 1012 Gene3D Ribonuclease Inhibitor 494 657 IPR032675 -
Rops9g01244 1012 Gene3D - 135 316 IPR027417 -
Rops9g01244 1012 Gene3D - 321 403 IPR042197 -
Rops9g01244 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 33 845 IPR044974 GO:0006952
Rops9g01244 1012 Gene3D - 6 113 - -
Rops9g01244 1012 FunFam Probable disease resistance protein At1g63360 405 493 - -
Rops9g01244 1012 CDD RX-CC_like 2 119 IPR038005 -
Rops9g01244 1012 SUPERFAMILY RNI-like 806 991 - -
Rops9g01244 1012 Gene3D Ribonuclease Inhibitor 659 852 IPR032675 -
Rops9g01244 1012 Gene3D Ribonuclease Inhibitor 853 1007 IPR032675 -
Rops9g01244 1012 FunFam Probable disease resistance protein At1g61300 134 316 - -
Rops9g01244 1012 Gene3D - 404 493 IPR036388 -
Rops9g01244 1012 Coils Coil 31 51 - -
Rops9g01244 1012 Pfam Rx N-terminal domain 6 86 IPR041118 -
Rops9g01244 1012 Pfam NB-ARC domain 156 385 IPR002182 GO:0043531
Rops9g01244 1012 SUPERFAMILY L domain-like 482 848 - -
Rops9g01244 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01244 Rops-Chr9 20584613 20587651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01244 181 584 WRKY Transcription Factor Family AT5G45050 23.301 5.62e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01244 - - mtr:11405813 1124.77