Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01228 ATGTCGAAGATTGTATGCGTGACTGGCGGCAGCGGATGCATTGGCTCATGGCTGGTTCATCTTCTTCTGGATCGCGGCTACACCGTGCACGCCACTGTCCAAAATCTCAACGATGAGAACGAGACGAAGCATCTAGAAGCTTTGGAAGGAGCATCCACCCGGCTCCGCCTCTTCCAGATCGATCTCCTCCGCTACGACACCATCCTCGCCGCCGTCCGCGGCTGCGCCGGCGTTTTCCACCTCGCCTCCCCTTGTATTGTGGACCAAGTTCATGACCCTCAGAAGGAGCTTCTAGACCCTGCGATTAAAGGGACCATGAACGTGCTTGCGGCGGCAAAGGAAGCAGGGGTGCAGCGCGTGGTGGTTACTTCCTCCATCTCCGCCATTACCCCGAGCCCTGCTTGGCCTAGTGATGTTGTCAAGAGAGAGGATTGCTGGACTGATATTGAGTACTGCAAACAAAAGGGGTTATGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTGCCAAAGAGAATGGTTTGGATGTTGTGGTAGTGAATCCCGGTACTGTGATGGGCCCTGTTATTCCACCAAGGCTTAATGCAAGCATGCTCATGCTTGTGCAAATTCTCCAAGGCTGCACTGAAACATATGAGGATTTTTTTATGGGGTCAGTCCATTTTAAAGATGTAGCTCTGGCACATATTTTGGTGTATGAGAACAAAGCTGCAGCTGGTAGACATCTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTGGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTGCCTAGGATGCAACGAGATACCCAACCAGGATTGTTGAGAGCAAAGGATGGATCAAAGAAACTCATGGATTTGGGTTTGGAATTCATTCCAATGGAGAACATTATTAAGGATGCTGTAGAGAGTTTGAAGAACAAGTCATTTCTTGAATGA 963 0.486 MSKIVCVTGGSGCIGSWLVHLLLDRGYTVHATVQNLNDENETKHLEALEGASTRLRLFQIDLLRYDTILAAVRGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLAAAKEAGVQRVVVTSSISAITPSPAWPSDVVKREDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVQILQGCTETYEDFFMGSVHFKDVALAHILVYENKAAAGRHLCVEAISHYGDFVAKVAELYPEYNVPRMQRDTQPGLLRAKDGSKKLMDLGLEFIPMENIIKDAVESLKNKSFLE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01228 320 Gene3D - 1 320 - -
Rops9g01228 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Rops9g01228 320 CDD FR_SDR_e 5 297 - -
Rops9g01228 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Rops9g01228 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
Rops9g01228 320 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01228 Rops-Chr9 20353714 20356195 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01228 3 319 Monolignol Biosynthesis Gene Families AT5G58490 77.287 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01228 - - gmx:100803241 597.045