Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01221 ATGTCTGAAAACGGGGAAGAGAAATTACTGGCTATGGCGCGGCACATAGCGAAAACGCTCGGCCACAACAGTAATATGTCTGATGATATTCTTCAAATATTCTCCAACTTTGATGGAAGGTTCTCGAAGGAGAATCTATCTGAGAAGGATGCAGCAGATCCGAGACCCTGGGCCGTACTGGATCACTCCCTCAAAACCCTCGACCGCCGGATCTCTCAATTTGTATCTTCTGACCGTCCCATCTGGGCCGATTCCGCCGACGCCGCCGCTTTCCTCGACGCCGTTGACGACCTCGTCGCCGCAGTTACCGAGTGGAACCACCTCGCCTCCGACAAGTCCATCTCCGCGTGCCTCGTCCGCGCTGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGGTCACTCGTGGAGCGCGGCGGCGAGTCATTCGACCTCACTCGGCCGTACCGGAACGGCGAGTCAACCGAAAACCTACCGTTCGACTCGGAGGAAGAAGAGGAAGATGAACTCTACGGCGAAGCCAGGAACGGAGGAGGAGAAGATGATCAGATTCCTGTGGCGATGCCGGTCACCGATTACGACATCGTCATCGACGCGCTGCCTTCGGGGACGATCAACGACCTTCATGAGATCGCGAAGCGCATGGTGGTCGGAGGTTTCGGTAAAGAGTGCTCGCACGTATACAGCAGTTGCAGGAGGGAGTTTCTAGAAGAAAGCCTCTCGAGATTAGGGTTACAGAAGCTTAGCATCGAGGATGTTCACAAGATGCCATGGCAAGACCTCGAAGACGAAATTGAAAGATGGATTAAAGCTTCCAATGTCGCTGTCAAGATACTCTTCCCTAGCGAGCGTAGACTCTGCGACCGCGTCTTCTTCGGCTTCGCCTCCGCCGCCGATTTCTCCTTCATGGAGGTTTGTAGAGGATCCACCATTCAGCTTCTCAATTTCGCCGATGCCGTCGCGATCGGAAGCCGTTCACCGGAACGGTTGTTCAAAATCCTCGACGTGTTTGAAACATTGCGTGACCTAATTCCTGAGGTTGAGTCTCTGTTTTCTGACCAGTACAGTGTGTCGCTCAGGAATGAAGCAATCACGATTTGGAAGAGATTGGGAGAAGCAATCAGGGGCATTTTCATGGAGTTGGAGAATCTGATTCGCCGGGATCCGGCGAAGGTGTCGGTTCCCGGTGGCAGGCTTCATCCGATTACACGCTACGTGATGAACTACCTCCGTGCCGCTTGCCGGTCACGGCAGACATTGGAACAAGTGTTTGAAGATTATGGACATCCATTGAAGGAATACCCTAAACTTGATGATAGAGTGCCATCTTCTTCCTCTCTCTCTGTGCAGATGGATTGGATTATGGAACTATTGGAGAGTAATTTAGAAGCAAAGTCCAAAATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAACGGCAGGTACATAGTTCAGAAGGCAAAAGATAGTGAATTGGGAACCCTTTTGGGAGATGATTGGATCCGAAAACACACTGCAAAAGTTAGGCAATATCATGTGCACTATCAAAGAAGCTCATGGAATAAATTGCTGGGTATTCTAAAGCTGGATAGCAATGGATCAGTGCCACCTAATGGGATAGTAAAGTCAATGAAAGAGAAGCTCAAGTCGTTTAACAACGCCTTTGAGGATATATGCAGGGCCCAGTCTTCTTGGATTGTGTTTGATGAGCAACTTAGGGAAGAAATAAGAATTTCCATTGAGAAAATCTTGTTGCCAGCTTATGGAAACTTCATTGCAAGGTTCAAGAGTGTTCCGGAACTTGGTAAGCAAGCTGATAAGTTTATTAAGTATGGAACGGAGGATATTGAAGCAAGACTGGATGATTTGTTTCAGGGAAGCAGTGCATCAAATGGTAGCCGAAAGTGA 1929 0.494 MSENGEEKLLAMARHIAKTLGHNSNMSDDILQIFSNFDGRFSKENLSEKDAADPRPWAVLDHSLKTLDRRISQFVSSDRPIWADSADAAAFLDAVDDLVAAVTEWNHLASDKSISACLVRAEDMLQHAMFRLEDEFRSLVERGGESFDLTRPYRNGESTENLPFDSEEEEEDELYGEARNGGGEDDQIPVAMPVTDYDIVIDALPSGTINDLHEIAKRMVVGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMPWQDLEDEIERWIKASNVAVKILFPSERRLCDRVFFGFASAADFSFMEVCRGSTIQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEVESLFSDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKVSVPGGRLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKEYPKLDDRVPSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHTAKVRQYHVHYQRSSWNKLLGILKLDSNGSVPPNGIVKSMKEKLKSFNNAFEDICRAQSSWIVFDEQLREEIRISIEKILLPAYGNFIARFKSVPELGKQADKFIKYGTEDIEARLDDLFQGSSASNGSRK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01221 642 MobiDBLite consensus disorder prediction 150 188 - -
Rops9g01221 642 FunFam Exocyst subunit Exo70 family protein 74 639 - -
Rops9g01221 642 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 633 IPR004140 GO:0000145|GO:0006887
Rops9g01221 642 Pfam Exo70 exocyst complex subunit 270 629 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops9g01221 642 SUPERFAMILY Cullin repeat-like 82 631 IPR016159 -
Rops9g01221 642 Gene3D Exocyst complex component Exo70 81 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01221 Rops-Chr9 20287888 20290118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01221 1 637 EXO70 exocyst subunit family AT5G58430 68.906 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01221 K07195 - gmx:100803694 1077