Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01215 ATGGCGTCCATGCTCAACCAAATTCGGAGATTGCTGATGCAGCCAGAGGTACGGAGATTTGTGAGCTTTGCTTCAGCTGTTGTTGGGCTGCTCTGTTACGCTCTCAGCACTTCCTTCCACCATCTATTTGGAAAGTGGAGCCTCTGGAAGATCTGTCTTTATGGCGTTATCAGTGTCTTAATCTGCCTCGCTGTCTTGTTTGCAAAGTCATGCCGATGCTTGACTAATCAAGCTCAATTGGCATTTTTGGTTTTGACCACAACCTCTGTGTACTCCTTTCTCTTCGACAGAGCGGTGAACGGAAAACCAGATGCATATAGTCTGGTTTCATGTGCTGCTTTTGCTATCATGTCGCTCAGCTTGTCAAAGCAGACTCACTGCGGAATTGAGGTTGATCTCCTATACTTTTTCTGCGGATTTTTAATGGTACAGCTCATGAAGTTAAAACTATTGTTAGTGATTGTTGGAGCGGGTTTCAGTTATTCCCTCATCATTCTTCGTTCCTCTTTGGACGCTGCAGCAGAAACTGTGCATCTTGTCCAAGTCCAAGATCAACAATATGTAGTCCTTCAAATCGATTCAAATTCAGATGAAACCAATACCAGTAGTGCTATTCAAGTGGATAGTGCTCCTATCATGCAGGAAAATGGGGACTTTGGACTGCAAGACCGCGCAATCACTGAAGACAATTCACATTCACAACAAGACAATAGTTACCATCATCTTCTGGAGTATGCTTTGATATATGCAGAAGGGTTGATTTTGTTGCTGCAGGTGAAGCAATACCTTGACTCCAAAACACAGAACCAGATTCCGGTGCGTCCCTATGAGCTGCCGTCCGGAATTATCATCGACCTTTGCAACACTGTGAAGTATGTGGTGGCAGCTGGGTTTGAGACGGAGTGCCGCAAGTTGTACGGCGTTTTACGGAGCAAATTCTTAAACAAGTGCCTGAGTATACTTGGGTTGCAAGAGGTCAACTTGTGGGAGGTGGAGAAGAAGAACATTGGGAGTTTGATCGATGCTTTCAACGTGGTTTTGAAGATATTGTTTCCTTTTGAAAGGGGCCTCTGGGGTCGCGTCTTCTCTGGGTTCTACTCTGCTGAGTGTAATATCTTTTCCGGGTCGGATTGGAGAAGAATAGAAATTGAATTGTGGGCTAAATTCCTTGTGTTGGAGACTCGTATTCGCTGTGATGTAGGGCAGGCGGCTTTTCCCAGTTGTGAGGTTCATCCCATTACCCACGCAGTGATGCGATGCCTCACGGATGTTTGTAAAGACAGGGATTTGACGTCTTATTCCCACGTGCCTGCGATGATACAGCTGTTAGAGAACAATTTAGAAGCCAAGTCCAAAAACTACAAGGTCCCTGCTTTGGGCTATCTTTTCATGGTGAATAATGGGAGACACATAAAGATGATGGCAAAAGATAATAATCTACTGCCAACCCTTCTATTAGACGATTGGAATGGAAGACATACTTCAAACTTTGAACACTGCCTGGGAAGCTCATGGAATAAGGTTGTGGAGTTTTTGAAGCTGGATAGCAATGAGTCAGTGGCGCCTAATGATTCAGCAGAGTCCATGAAGAAAAAGCTCAATTTGTTCAACCAGCACTTTGAGGAGATATGCAGAGTTCAGTCTACATGGTTTGTCATTGATGAGAAACTAAAGGAAAAAATGAGAAGGTCCCTGGAAGAGATCTTGTTGACAGCATACGAAAACTTCATTAGGAGGTTCCAGGATGTTCTTGGGAAGCATGCTGCTGAGTATATTAAGTATAAAAAGCTGGACATTATAATTAAACTCCACCGTTTGTTTCGGGGAAGCAAGCGGATGAGTTCAGGGCCGAAAAAGAAGCAAAGGCAACGAAATCTTGTGGTTGAAAGAAAAAATAAAAGATTGTGTAAGTTATGA 1917 0.4371 MASMLNQIRRLLMQPEVRRFVSFASAVVGLLCYALSTSFHHLFGKWSLWKICLYGVISVLICLAVLFAKSCRCLTNQAQLAFLVLTTTSVYSFLFDRAVNGKPDAYSLVSCAAFAIMSLSLSKQTHCGIEVDLLYFFCGFLMVQLMKLKLLLVIVGAGFSYSLIILRSSLDAAAETVHLVQVQDQQYVVLQIDSNSDETNTSSAIQVDSAPIMQENGDFGLQDRAITEDNSHSQQDNSYHHLLEYALIYAEGLILLLQVKQYLDSKTQNQIPVRPYELPSGIIIDLCNTVKYVVAAGFETECRKLYGVLRSKFLNKCLSILGLQEVNLWEVEKKNIGSLIDAFNVVLKILFPFERGLWGRVFSGFYSAECNIFSGSDWRRIEIELWAKFLVLETRIRCDVGQAAFPSCEVHPITHAVMRCLTDVCKDRDLTSYSHVPAMIQLLENNLEAKSKNYKVPALGYLFMVNNGRHIKMMAKDNNLLPTLLLDDWNGRHTSNFEHCLGSSWNKVVEFLKLDSNESVAPNDSAESMKKKLNLFNQHFEEICRVQSTWFVIDEKLKEKMRRSLEEILLTAYENFIRRFQDVLGKHAAEYIKYKKLDIIIKLHRLFRGSKRMSSGPKKKQRQRNLVVERKNKRLCKL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01215 638 Pfam Exo70 exocyst complex subunit 434 599 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops9g01215 638 SUPERFAMILY Cullin repeat-like 255 607 IPR016159 -
Rops9g01215 638 Gene3D Exocyst complex component Exo70 378 615 - -
Rops9g01215 638 Gene3D Exocyst complex component Exo70 223 376 - -
Rops9g01215 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 212 368 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01215 Rops-Chr9 20182980 20185276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01215 339 610 EXO70 exocyst subunit family AT5G58430 37.584 1.49e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01215 - - psat:127118472 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01215 9 20182980 20185276 Rops9g01215 9 20182980 20185276 ECH