Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01213 ATGCGCATCCGAATTTCCAATCGGCTTATACAGAAAAAGAAGCTATGGAGAGTTATGGGATTTATTTCAAGTGTCGTTGGACTGATCTGTTATGCTTTGAGTTCCTCTTTCAAACATCTATTTGGAGAGTGGAACTTCTTCAAGATCATGGTTTACACAGTGGTAAGTTTCAGTATCAGTAGCACAATGTTATTTTTGAAGAAATGGAAACTTTCGAGGAGTTTCTTGTTGAAAGCTCACTCTGGTGTTCTGGTTTTGTTGCTCACCTCTTTGTACTCTTTTGTATCTGATAAAGCTGTGAATGGAAAACCAGACCTATTAAGTCTGATTTCATGTGCAGCCTTTGCTTTCATGTCTCTGTGTCTGTCAAAGCAGATACACCTTGGGTTTGAAGCTGATCTCCTCAATTTCTTCCTTGGAATTCTAACTGTTCAATTGATGAAGATCAACTTGATGCTTTCTATAATTGCAGTCATCTTCTGTTATTCTCTCATGGTTCTTCGTTCCAAATTGAATTCGCAACCAGAGATTGGAACTCTAAGAATGGAAGACCAAGTAGCTGTGGAAATTGATGCTGCAGATGGAGGAGAAAGAGGAGCTGATGACAACAGCATTGACTTCCAATCTGATCATAGCAATCGTCGCCAGCAAATTCAGTTGTTAACAAGAAGAAGGGTGGATAATGGGTACAATTGGAGAAAATATGAAGAGAAACAAGTGAAAAGAAGTGAAAATCTGAGGAGTTATTACAAATGCGCGTCCCCCAAGTGCCGTGTGAGGAAAAAAGTTGAGAGAACTATAGATGGGCAAATTATTGAGACACTCTACAAGGGTACCCATAACCATTGCAAACCTACGTTTACAATGAAGAGGAACTCATCATCTGATTATTTTTATTCACTTTTACCTTCAGAGCCTGTCCCCACTGACATTCAGATCAATCATTTGCCTCCCAATGGACAATTCGATTGCGATGAAGCACCAGAAAACTCCTCAGTTTCAATATGA 1008 0.3938 MRIRISNRLIQKKKLWRVMGFISSVVGLICYALSSSFKHLFGEWNFFKIMVYTVVSFSISSTMLFLKKWKLSRSFLLKAHSGVLVLLLTSLYSFVSDKAVNGKPDLLSLISCAAFAFMSLCLSKQIHLGFEADLLNFFLGILTVQLMKINLMLSIIAVIFCYSLMVLRSKLNSQPEIGTLRMEDQVAVEIDAADGGERGADDNSIDFQSDHSNRRQQIQLLTRRRVDNGYNWRKYEEKQVKRSENLRSYYKCASPKCRVRKKVERTIDGQIIETLYKGTHNHCKPTFTMKRNSSSDYFYSLLPSEPVPTDIQINHLPPNGQFDCDEAPENSSVSI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01213 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 213 304 IPR044810 GO:0003700
Rops9g01213 335 FunFam WRKY transcription factor 212 286 - -
Rops9g01213 335 SUPERFAMILY WRKY DNA-binding domain 222 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01213 335 Gene3D WRKY domain 214 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01213 335 ProSiteProfiles WRKY domain profile. 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01213 335 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01213 335 Pfam WRKY DNA -binding domain 227 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01213 Rops-Chr9 20160921 20162303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01213 215 292 WRKY Transcription Factor Family AT1G13960 56.410 1.48e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g01213 WRKY 6.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01213 - - ccaj:109792596 419.853