Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01212 ATGCACATTGGCACCATTGTTGTTGCTACAAGCAATGACTTAACAAGACCCAAGTTCTCATCAATTCTAGTCTTTGGGGATTCAACTGTAGACACAGGCAATAACAACTATATCGAGACTTTGGCAAAGGGGAATCATTTTCCTTATGGAATTGATTTCCCTGGTCATGTGCCCACTGGTAGATTCTCTAATGGAAAATTGGTTATTGACTTCATTGCCTCTGCATTGAACCTCAAAGACACTGTCCCTCCTTTCTTGGACCCAAACCTATCAAATGAAGAGCTTCTAACAGGTGTTAGCTTCGCTTCTGGGGGATCAGGTTTTGATGATTTGACTACAGTTGTATCTGGTGCCATACCAGTTTCCAAGCAAATTGAATACTTCAAAGTTTATGTAACAAACCTCAAGCACATTGCAGGGGAAATTAAAGCTAAAAAAGTACTTGAAGATGCTCTGGTTATTATTAGTGCCGGAACTAATGACTTCGTTTTAAATTTTTATGATATTCCTACTAGAAAGTGGGAGTTCAACGTTACTGGGTATCAAGATTATCTCCAGAATAGGCTTCAAATCTTCATTAAGAAACTATACGACCTTGGATGCAGAAAATTTGCTGTCACTGGGCTTCCTCCCATTGGCTGCATACCCATTCAAATAACAGTCGAGTTTGTAAGTTTAAAGGATCGGAAATGTGTAGAGGATGAGAATTTAGACGCCGAGATCTACAACCGAAAGTTGGCACGGCGATTACTTCAAATACAAGCAATGCTTCCCGGAAGCAGAGTTGTTTATACAGACATATATGACCCCTTGATCAACCTTATCAATCATCCTGAAAAATATGGTGAGCTATATTAA 858 0.3939 MHIGTIVVATSNDLTRPKFSSILVFGDSTVDTGNNNYIETLAKGNHFPYGIDFPGHVPTGRFSNGKLVIDFIASALNLKDTVPPFLDPNLSNEELLTGVSFASGGSGFDDLTTVVSGAIPVSKQIEYFKVYVTNLKHIAGEIKAKKVLEDALVIISAGTNDFVLNFYDIPTRKWEFNVTGYQDYLQNRLQIFIKKLYDLGCRKFAVTGLPPIGCIPIQITVEFVSLKDRKCVEDENLDAEIYNRKLARRLLQIQAMLPGSRVVYTDIYDPLINLINHPEKYGELY* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01212 285 PANTHER GDSL ESTERASE/LIPASE EXL3 19 282 - -
Rops9g01212 285 Pfam GDSL-like Lipase/Acylhydrolase 22 273 IPR001087 GO:0016788
Rops9g01212 285 SUPERFAMILY SGNH hydrolase 21 276 - -
Rops9g01212 285 CDD SGNH_plant_lipase_like 21 282 IPR035669 -
Rops9g01212 285 Gene3D SGNH hydrolase 10 284 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01212 Rops-Chr9 20157411 20158640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01212 11 282 Pollen Coat Proteome AT1G75910 36.364 9.61e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01212 - - gmx:100817270 464.922