Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01209 ATGATGGATCACCAATCTGACCAAGGATTTGATTCAGATGGTAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACATGAGAAATTAGAAGATGTGTTTTCAAAAGATTTAGAATTATGTTCAGTGGAAGATGAAAAGTTTGTTGAACAATCTGTAGCAAACACAGAAGCTTTGGAACCATTCATTGGCATGCAGTTCAGTTCAAGGGAGGAAGCCAGAGAATTCTACATTACCTATGGTAGGCGAATAGGATTTACAGTACGAATACACCATAACCGTCGTTCACGAGTGAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGCGCAAAAAAAAGAGAGCATACTCATGAGCTGTTGGGTCCCAGTAAAGTTCCATGGCGAGGGTCTGGGAAGCACTGGGTTAATGAGGATGAGAAAGATAAGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGACAAAAGTGCAAACGACTTTGTGCTGCATATGAAGAACAGTTAAACAACATACACTGA 540 0.3981 MMDHQSDQGFDSDGSDLDMQAEISEKHEKLEDVFSKDLELCSVEDEKFVEQSVANTEALEPFIGMQFSSREEAREFYITYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKREHTHELLGPSKVPWRGSGKHWVNEDEKDKRIRELSLELYNERQKCKRLCAAYEEQLNNIH* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01209 179 Pfam FAR1 DNA-binding domain 75 122 IPR004330 -
Rops9g01209 179 MobiDBLite consensus disorder prediction 1 22 - -
Rops9g01209 179 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01209 Rops-Chr9 20072500 20073160 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g01209 FAR1 4.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01209 - - gmx:100810283 269.24