Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01208 ATGAAGTCTTCTTCTTCACTTCCTCCAAACTTGGATAACACATACGCAATTTCTTTGATCGGTTTCTTGGCTTTCTACTTGCTTAGGATGAGGCAAAAGCAGTTGACCAGGGTCAAGGGCCCAAATGCATTAGTTATTCACCCTAGGCATTCTAGATCATATAATGATAGTGTGAAGATAACAGTTGTTGGTTCAAGTGTCAGTGTTGGTGGTGTTAGAGAAACCCAAACTGTACCCAACAATAATGATAGTGTGAAGATAACAGTTGCTGGTTCAAGTGTAAGTGTTGGTGGTGTTAGTGAAACACAAACTGTACCCAGCAATGAGGTAGGAGATATTCAAATGGTTGAATCAAGAAACATGGTCATTTCTATACAAGTCCTGAAGAATGTCATTAACAATTTCGATGAGAAAAATATACTGGGACATGAAGGTTTTGGAACAGTTTATAAAGGAAGGACTGGAACCATTAGAGTGGAACAAAAGATTAACCATTGCCTTAGATTAGCAAAGGGTGTTGAGTACCTTAATGTCTTAGCCCATCAAAGCTTCATACGCAGAGATTTGAAACCATCAAACATTCTCCTTGGAGATGATATGATTGCAAAGGTTGATGATTTTGGTATAGTGCCTCTTGTTCCAAAAGGAAAAGCCTTCATTGATACAAGAATTGTAATAACTTTTGGATATTTGGCACCAGAATATGCAGGTAAATTACCAAGTTTTAGGAGCAACATAGTTGTCACCACGAATGGTAACAATGATATAGGGAAGGATAAATACAGTCTTTCCCCTCAAGGTTCAGTGTCTCCAACAACTAACGATGCAAGTGGAGAAAAATGTGGGATTTCTGGAAACAGTGGAAAAAAGTCATCTTCCCATGATGAGGCAAATGCAGTTGATAGGGTCCAGAGCACAAATGCACTAGTTATTCATCCTAAGCATTCTGGATCAGATAATGATAGTATGAAGATAACAATTGTTGGTTTAAGTGTTAATGTTGGTGGTGCTAGTGAAACCCACATTGTACCTAGCAGTGAGGTAGGAGATATTCAAATGGTTGAATCAAGAAACATGGTCATTTCTATACAAGTCTTGAAGAATGTCACTAGCAATTTTAGTGAGAAAAATATATTGGGACTGTCACGACCGGGATTGCGAGCGGATGGCGAGAGAAAATAG 1182 0.3858 MKSSSSLPPNLDNTYAISLIGFLAFYLLRMRQKQLTRVKGPNALVIHPRHSRSYNDSVKITVVGSSVSVGGVRETQTVPNNNDSVKITVAGSSVSVGGVSETQTVPSNEVGDIQMVESRNMVISIQVLKNVINNFDEKNILGHEGFGTVYKGRTGTIRVEQKINHCLRLAKGVEYLNVLAHQSFIRRDLKPSNILLGDDMIAKVDDFGIVPLVPKGKAFIDTRIVITFGYLAPEYAGKLPSFRSNIVVTTNGNNDIGKDKYSLSPQGSVSPTTNDASGEKCGISGNSGKKSSSHDEANAVDRVQSTNALVIHPKHSGSDNDSMKITIVGLSVNVGGASETHIVPSSEVGDIQMVESRNMVISIQVLKNVTSNFSEKNILGLSRPGLRADGERK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01208 393 PANTHER OSJNBA0070M12.3 PROTEIN 16 154 - -
Rops9g01208 393 Gene3D Phosphorylase Kinase; domain 1 95 166 - -
Rops9g01208 393 MobiDBLite consensus disorder prediction 257 297 - -
Rops9g01208 393 ProSiteProfiles Protein kinase domain profile. 58 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01208 393 Gene3D Transferase(Phosphotransferase) domain 1 171 236 - -
Rops9g01208 393 Pfam Protein kinase domain 150 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01208 393 SUPERFAMILY Protein kinase-like (PK-like) 113 238 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01208 Rops-Chr9 20064152 20068184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01208 151 239 Trihelix Transcription Factor Family AT1G70460 42.857 3.21e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops9g01208 Pkinase 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01208 K00924 - mdm:103444356 157.147