Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01194 ATGGCAAAGGCCATTGCAAAATCATTCCCACAGATGGAGTGCATCGTATTTGATCTCCCACATGTTGTTGCTGACTTGCAAGGAAGTGAGAACCTAAAATATGTTGGAGGGGACATGTTTAAGGCAATTCCTCCAGCCGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGATGAGGAATGTGTGAACATACTGAAGAAATGCAAGGAGGCAATCACCAGCAAAGGTAAAAAAGGGAAGGTGATTATCATAGACATAGTGATGGAAAATGAGAAGGGAGACCATGAATCAATTGAAACACAACTCTTCTTTGATATGCTGATGATGGTGTTGGTCACGGGAAAAGAGAGAACCAAGAAAGAATGGGCTAAGTTGATTACTTCAGCTGGTTTCAATGACTACAATATAACTCCAGTTATGGGCTTAAGGTCTGTTATTGAGATCTATCCATAG 459 0.4074 MAKAIAKSFPQMECIVFDLPHVVADLQGSENLKYVGGDMFKAIPPADAILLKWILHDWNDEECVNILKKCKEAITSKGKKGKVIIIDIVMENEKGDHESIETQLFFDMLMMVLVTGKERTKKEWAKLITSAGFNDYNITPVMGLRSVIEIYP* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01194 152 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 152 IPR016461 GO:0008168
Rops9g01194 152 PANTHER O-METHYLTRANSFERASE 2 136 IPR016461 GO:0008168
Rops9g01194 152 Pfam O-methyltransferase domain 2 134 IPR001077 GO:0008171
Rops9g01194 152 Gene3D Vaccinia Virus protein VP39 1 152 IPR029063 -
Rops9g01194 152 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 150 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01194 Rops-Chr9 19842930 19843635 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01194 5 152 Monolignol Biosynthesis Gene Families AT1G51990 42.105 6.09e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01194 - - gmx:100807238 264.618