Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01193 ATGCCACCCTCACAACTCATTGCTTCACTGCCAATCCACCCATCCAAAACCAGTTGCATCTATCGCTTGATGCGAATCATGACCTATTCTGGCTTCTTCTCTCAACAGAATATCACTGAGAATGAGCTAGAAGTGGAATATGTGCTAACTGATGCATCTATACTACTGATTAAGAACCATCCCATGAGTGTGACACCATTCTTGCATGCCATGCTTGATCCAATTTTGACAAACCCATCACATCAATTATCTACTTGGTTCAAAAATGATGATCTTACACCGTATAAAACGACACATGGGATGTTTATTTGGGATCATGCTGAGAGTGATCCCAAATTTAATCACTTGTTCAATGAAGGCATGGCAAGTGATGCTCAACTGATCCCCAATGTGATGATGGAGAAGTGCAAGGGGGTGTTTACAGGATTAGAGTCATTAGTTGACATTGGTGGAGGCACAGGGACTACGGCAAAGGCAATTGCCAAATCATTCCCACAGATGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGGGTTGCAATGA 549 0.4262 MPPSQLIASLPIHPSKTSCIYRLMRIMTYSGFFSQQNITENELEVEYVLTDASILLIKNHPMSVTPFLHAMLDPILTNPSHQLSTWFKNDDLTPYKTTHGMFIWDHAESDPKFNHLFNEGMASDAQLIPNVMMEKCKGVFTGLESLVDIGGGTGTTAKAIAKSFPQMECIVFDLPHVVAGLQ* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01193 182 SUPERFAMILY "Winged helix" DNA-binding domain 2 61 IPR036390 -
Rops9g01193 182 Gene3D Vaccinia Virus protein VP39 57 182 IPR029063 -
Rops9g01193 182 PANTHER O-METHYLTRANSFERASE 3 178 IPR016461 GO:0008168
Rops9g01193 182 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 182 IPR016461 GO:0008168
Rops9g01193 182 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 179 IPR029063 -
Rops9g01193 182 Pfam O-methyltransferase domain 83 179 IPR001077 GO:0008171
Rops9g01193 182 Gene3D - 1 56 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01193 Rops-Chr9 19826753 19827301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01193 1 178 Monolignol Biosynthesis Gene Families AT5G54160 30.220 6.94e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01193 - K16040 gmx:100781008 275.018