Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01192 ATGATGAAGCAGTGGATAATGCATGACTGGAATGATGAGGAGTGTATCAACATACTGAAGAAATGCAAGGAGGCAATCACGAACAAAGGCAAAGAAGGGAAGGTGATTATCATAGACTTTGTGATGGACAATGAGAAGGGATACCATGAATCGATTGAAACACAGCTCTTCTGTGATGTGATGTTAATGGTGTTGTACACTGGCAAAGAGAGAACCAAGAAAGAATGGGCTAAATTGATTACTTCTGCTGATTTCAGTGACTACAAGAAGATAACTCCATTTTTGGGCTTAAGGTCTGTCATTGAGATCTATCCATAG 318 0.3962 MMKQWIMHDWNDEECINILKKCKEAITNKGKEGKVIIIDFVMDNEKGYHESIETQLFCDVMLMVLYTGKERTKKEWAKLITSADFSDYKKITPFLGLRSVIEIYP* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01192 105 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 102 IPR029063 -
Rops9g01192 105 Gene3D Vaccinia Virus protein VP39 1 105 IPR029063 -
Rops9g01192 105 PANTHER O-METHYLTRANSFERASE 2 89 IPR016461 GO:0008168
Rops9g01192 105 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 105 IPR016461 GO:0008168
Rops9g01192 105 Pfam O-methyltransferase domain 4 86 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01192 Rops-Chr9 19825984 19826301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01192 1 105 Monolignol Biosynthesis Gene Families AT1G51990 38.532 1.42e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01192 - K16040 gmx:100807238 161.384