Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01184 ATGGAATCCCACGATGGAAAGCATGTTGCCAAACTGCTTCGAGCCCAAAGCCACATATGGAATCACATTTTCAACTTCATAAACTCCATGTCCCTTAAATGCGTAGTTGACTTAGACATACTAGATGTCTTACACAACTATGCCAAACCCATGCCACTTTCACAACTCATTGCTTCGCTACCAATCCACCCATCAAAAACCTGTTGCATCAATCGCTTAATGCGAATCACTATCCATTTTGGCTTGTTCTGTCAACAGAATCTCATTGAGAATGAGCTAGTGGAGTATCTGCTAACTGATTCATCTGTACTACTGCTTAAGAACCATCCCATGAGTGTGACACCATTCTTGTATGCCATGCTTGATCCAGTTATGACAAACCCATGGCATCAATTGTCTACTTGGTTCAAAAATAATGATCCTACACCCTTTAAAATAGCACATAGGATGATGCTTTGGGATTATGTTGAGAATGATCCCAAACTTAATAACTTGGGCAATGATGGCATGGTAAGTGACGCTCGATTGGTCACAAGTGTGGTGGTTGAGAAGTGTAAGCGGGTGTTCACAGGATTGAAGTCATTGGTTGATGTTGGGAGAGGCACAGGGACTATGGCAAAGGCCATTACCAAATCATTCCCATAA 645 0.4202 MESHDGKHVAKLLRAQSHIWNHIFNFINSMSLKCVVDLDILDVLHNYAKPMPLSQLIASLPIHPSKTCCINRLMRITIHFGLFCQQNLIENELVEYLLTDSSVLLLKNHPMSVTPFLYAMLDPVMTNPWHQLSTWFKNNDPTPFKIAHRMMLWDYVENDPKLNNLGNDGMVSDARLVTSVVVEKCKRVFTGLKSLVDVGRGTGTMAKAITKSFP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01184 214 Pfam Dimerisation domain 30 76 IPR012967 GO:0046983
Rops9g01184 214 Pfam O-methyltransferase domain 129 214 IPR001077 GO:0008171
Rops9g01184 214 Gene3D Vaccinia Virus protein VP39 106 214 IPR029063 -
Rops9g01184 214 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 214 IPR016461 GO:0008168
Rops9g01184 214 PANTHER O-METHYLTRANSFERASE 13 214 IPR016461 GO:0008168
Rops9g01184 214 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 214 IPR029063 -
Rops9g01184 214 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Rops9g01184 214 Gene3D - 1 105 IPR036388 -
Rops9g01184 214 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01184 Rops-Chr9 19440164 19440808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01184 30 214 Monolignol Biosynthesis Gene Families AT5G54160 28.421 8.15e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01184 - K16040 gmx:100781008 340.502