Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01181 ATGGGATCCTACGATGGAGATCATGCTGCCAAACTACTTCGAGCTCAAAGCCACACATGGAATCACATTTTCAACTTCATAAACTCCATGTCCCTTAAATGCGTAGTTGACTTAGGCATACCAGATGTCATACACAACTATAGCAAACCCATGCCACTCTCACAACTCATTGCTTCACTACCAATCCACCCATCCAAAACCTTCTGTATATATCGCTTGATGCGAATCATGATCCATTCTGGCTTCTTCTCTCAACAGACTGTCACCGAGAATGAGCTAGAAGTAGAGTATATGCTAACTGATGCATCTATACTATTGATTAAGAACCATCCTTTGAGTGTGACACCTTTCTTGCATGCCATGCTTGATCCAATTTTGACAAACCCATGGCATCAATTGTCTACATGGTTCAAAAATGATGATCCTACACCGTTTGAAACGACACATGGGATGTTGTTTTGGGATTATGCTGAAAGAGAGCCCAAACTTAATCACTTTTTTAATGATGGCATGGCAAGTGATGCTCGAATTGGTCGCCAATGTGGTGATGGAGAAGTGCAAGGGGAAGTTCACGGGATTGGAATCATTGGTTGA 594 0.4209 MGSYDGDHAAKLLRAQSHTWNHIFNFINSMSLKCVVDLGIPDVIHNYSKPMPLSQLIASLPIHPSKTFCIYRLMRIMIHSGFFSQQTVTENELEVEYMLTDASILLIKNHPLSVTPFLHAMLDPILTNPWHQLSTWFKNDDPTPFETTHGMLFWDYAEREPKLNHFFNDGMASDARIGRQCGDGEVQGEVHGIGIIG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01181 197 PANTHER O-METHYLTRANSFERASE 13 177 IPR016461 GO:0008168
Rops9g01181 197 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 197 IPR016461 GO:0008168
Rops9g01181 197 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 177 IPR029063 -
Rops9g01181 197 Gene3D - 2 106 IPR036388 -
Rops9g01181 197 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Rops9g01181 197 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Rops9g01181 197 Gene3D Vaccinia Virus protein VP39 107 188 IPR029063 -
Rops9g01181 197 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01181 Rops-Chr9 19391528 19392121 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01181 30 177 Monolignol Biosynthesis Gene Families AT5G54160 23.684 4.88e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01181 - K16040 gmx:100808660 299.671