Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01180 ATGGAGTGCACCGTATTTGATCTCCCACATGTTGTTGCTGACTTGCAAGGAAGTGAGAACCTAAAATATGTTGGAGGGGACATGTTTAAGGCAATTCCTCCAGCTGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGATGAGGAATGTGTGAACATACTGAAGAAATGCAAGGAGGCAATCACGAGCAAAGGTAAAAAAGGGAAGGTGATTATCATAGACATAGTGATGGAAAATGAGAAGGGAGACCATGAATCAATTGAAACACAACTCTTCTTTGACATGCTGGTGATGGTGTTGGTCAACGGAAAAGAGAGAACCAAGAAAGAATGGGCTAAGTTGATTACTTCAGCTGGTTTCAGTGATTACAAGATAACTCCAGTTATGGGCTTAAGGTCTGTTATTGAGATCTATCCATAG 426 0.4085 MECTVFDLPHVVADLQGSENLKYVGGDMFKAIPPADAILLKWILHDWNDEECVNILKKCKEAITSKGKKGKVIIIDIVMENEKGDHESIETQLFFDMLVMVLVNGKERTKKEWAKLITSAGFSDYKITPVMGLRSVIEIYP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01180 141 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 139 IPR029063 -
Rops9g01180 141 PANTHER O-METHYLTRANSFERASE 1 126 IPR016461 GO:0008168
Rops9g01180 141 Gene3D Vaccinia Virus protein VP39 1 141 IPR029063 -
Rops9g01180 141 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 141 IPR016461 GO:0008168
Rops9g01180 141 Pfam O-methyltransferase domain 1 123 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01180 Rops-Chr9 19390596 19391844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01180 6 141 Monolignol Biosynthesis Gene Families AT1G51990 43.571 1.32e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01180 - K16040 gmx:100807238 240.35