Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01178 ATGCCTTCAACTGCTTTACAATGGTTAAGCCTTGTGAGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACCAGTTTCCCTGCTTACTCCTCCCAGCTGAAGCAATTCCTTTCCATGTCCCAAGTTCAGCTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCTGGCATGGCTGCTGTTTATCTTCCCCTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGGTATGGTGTGCAATATCTCTTCATAACAAACCAAATTTCCTCTTTGTCCTATTGGCATGTCTTTTTACTAACTGTTCTAGCAGGGAATAGCATTTGTTGGATTAACACTGTCTGCTATGTGGTCACAATAAGGAACTTTTCATCTGATCGCCAAGTAGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTATACCAGCATTGTTGATGTTGTTTCTGAACACAACAAAGCTAGAACCTTTCTCTTTCTAAACTCAATTGTACCTGTGATCGTTGGCCTTATTGCAGCTCCGCTAGTCAGAGAAATTGAAGTCACAAGGCCTAAACACATGGGTGTTGGATTTGTTGTCATGTTTGTTGTTACAATTGCCACTGGAATATATGCTGTGATGAGTAGCTTGCAATTTGTCTCTAGCAAAATATCTCCACTGGGTAACCTTATTGGTATTCTAGTGTCCCTTTTCTTCCCTCTGTTAATTCCAGTTTCCATGAAGATCAATGCAATAGTGGGATCATGGCACACAAATAGAGAAAGACAAAGAGTGTATGATTTTACTGCAGAGGAGAGTCATACCACAAATGAAGAGAGCACAGAGAATAATGAGGTGAAAGAGGGTGAAAATAGTAGTGAAGTTCAAGAGATAGGTATCAGAGAAGAAATTGGAGTGAAGTTGATGCTGAGAAAAATAGATTTCTGGTTATATTTCTTTGTCTATTTATTTGGTGCAACACTTGGTTTAGTATTTCTCAATAACTTAGGACAAATAGCTGAATCTCGGGGTTGCTCTGGTACTTCATCATTGGTGTCTTTGTCTTCCTCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGGACTACTTTTACAGGGGAAAGTGTAGAATATCAAGACCAGCTTCAATGGTGGCATTGATGGCTCCAACAGCTGGGGCATTCTTCTTGCTTCTCAATAAAACTCACCTTGCCCTCTACATTAGCACTGCCATAATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACCACCACTGAGCTATTTGGAATCAAGAATTTCTCTGTGAATCATAATGTGTTGGTGGCTAACATTCCAGTGGGTTCCTTTCTGTTTGGCTACTTGGCTGCTCTTGTTTATCACATGGAAGGGCATGATGAACATGGGAAATGCATCGGCATGAAATGCTACAGAAAAACTTTCATGATCTGGGGTTCACTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAGAAAACAATAGTGTAA 1566 0.4068 MPSTALQWLSLVSIIWLQAINGTNTSFPAYSSQLKQFLSMSQVQLNNLAFASDAGKLFGCFSGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDVVSEHNKARTFLFLNSIVPVIVGLIAAPLVREIEVTRPKHMGVGFVVMFVVTIATGIYAVMSSLQFVSSKISPLGNLIGILVSLFFPLLIPVSMKINAIVGSWHTNRERQRVYDFTAEESHTTNEESTENNEVKEGENSSEVQEIGIREEIGVKLMLRKIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGKCRISRPASMVALMAPTAGAFFLLLNKTHLALYISTAIIGVCTGAITSIAVSTTTELFGIKNFSVNHNVLVANIPVGSFLFGYLAALVYHMEGHDEHGKCIGMKCYRKTFMIWGSLCFFGTFLALILHARTRKFYSQKTIV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01178 521 CDD MFS_Mch1p_like 6 501 - -
Rops9g01178 521 SUPERFAMILY MFS general substrate transporter 5 513 IPR036259 -
Rops9g01178 521 MobiDBLite consensus disorder prediction 276 296 - -
Rops9g01178 521 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 516 - -
Rops9g01178 521 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01178 Rops-Chr9 19355045 19357172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01178 1 518 Nodulin-like Gene Family AT2G30300 48.582 1.70e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01178 - - gmx:100808034 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01178 9 19355045 19357172 Rops9g01178 9 19355045 19357172 ECH
Rops11g02302 11 38847045 38849042 Rops9g01178 9 19355045 19357172 PCT