Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01167 ATGGATTCTCGTCTCCAATGTTTTCTTATGCTTTTTATGGTCACTTTGACAACAGTTTTTATCCCTACCTTTGCGAAGCTGACTCCTAATTATTATGACAAAGTTTGCCCTCAAGCATTGCCAATCATAAAATCAGTTGTGAAGCAGGCAATTATTCTTGAACCACGCATGGGAGCATCGTTACTTCGTTTACATTTTCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTTCTGCTAGATGACAACCCTTTCTTCGTGGGTGAGAAGACTGCACTTCCAAATCTTAATTCAATCAGAGGTTTTGAGGTGGTTGATCAAATTAAAGCAGCAGTTGACAAAGCTTGCAAAGGTCCTGTGGTATCATGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTAGCCATAGTGTTTGTGTATTTGAGGATGCAGTTGCCGGAGAAGGCCACAGTTTGA 459 0.4118 MDSRLQCFLMLFMVTLTTVFIPTFAKLTPNYYDKVCPQALPIIKSVVKQAIILEPRMGASLLRLHFHDCFVNGCDGSVLLDDNPFFVGEKTALPNLNSIRGFEVVDQIKAAVDKACKGPVVSCADILAIAARDSVAIVFVYLRMQLPEKATV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01167 152 PANTHER PEROXIDASE 72-RELATED 25 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 ProSiteProfiles Plant heme peroxidase family profile. 26 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 Pfam Peroxidase 44 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01167 152 Gene3D - 27 148 - -
Rops9g01167 152 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Rops9g01167 152 SUPERFAMILY Heme-dependent peroxidases 27 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01167 Rops-Chr9 19223590 19228102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01167 25 135 Peroxidase AT5G05340 65.766 4.41e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01167 K00430 - gmx:100810852 228.409