Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01166 ATGGATTCTTGTCTTCAATCTTCTCTTGTGCTTTTTATAGTCACTTTGGCAACATTTCTAATCCCTATTGCTACGTTGACTCCTGATTATTATGACAAAGTTTGCCCTCAAGCATTGCCAATCATAAAATCAGTTGTTAAGCAAGCAATTATTCGTGAACCACGCTTGGGAGCATCGTTACTTCGTTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTTCTGCTAGATGACACCCCTTTCTTCGTGGGTGAGAAGACTGCACTTCCAAATCTTAATTCAATCAGAGGTTTTGAGGTGGTTGATCAAATTAAAGCAGCAGTTGAAATAGCTTGCAAAGGTCCTGTGGTATCATGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTAGCCATAGTGAGTGTTATCCAAATCTTTCCCTCTAGCAGTTCTTTTTATGTGGACCATAAACTAAAAACTAACAAATTTTGCTTCTATTAA 492 0.3882 MDSCLQSSLVLFIVTLATFLIPIATLTPDYYDKVCPQALPIIKSVVKQAIIREPRLGASLLRLHFHDCFVNGCDGSVLLDDTPFFVGEKTALPNLNSIRGFEVVDQIKAAVEIACKGPVVSCADILAIAARDSVAIVSVIQIFPSSSSFYVDHKLKTNKFCFY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01166 163 Gene3D - 26 152 - -
Rops9g01166 163 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Rops9g01166 163 ProSiteProfiles Plant heme peroxidase family profile. 25 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 SUPERFAMILY Heme-dependent peroxidases 26 138 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 Pfam Peroxidase 43 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01166 163 PANTHER PEROXIDASE 72-RELATED 24 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01166 Rops-Chr9 19187161 19188677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01166 24 134 Peroxidase AT5G05340 64.865 9.34e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01166 K00430 - gmx:100810852 219.935