Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01165 ATGGTTTCTCATCTTCTCAAGTCACTCCTTGTGCTTGTTATGGTCACATCATTAGTGATACCTAACAATGCACAACTTTCTCCTTATTTTTATAATAAGGTTTGCCCTCAGGCATTGCCAGTCATAAAATCTGTAGTTCAACGAGCTATTCTCCGTGAGAGACGCATTGGAGCATCTCTGTTGCGCTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTGTTACTAGATGACACCCGTAACTTCACTGGCGAGAAGACTGCATTTCCAAATATCAATTCAATCAGAGGATTTTCAGTGGTTGATGAAATCAAAGCAGCAGTTGACAAAGCTTGCAAACGCCCTGTGGTTTCTTGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTAGTCATACTCTGGTAA 417 0.4149 MVSHLLKSLLVLVMVTSLVIPNNAQLSPYFYNKVCPQALPVIKSVVQRAILRERRIGASLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTAFPNINSIRGFSVVDEIKAAVDKACKRPVVSCADILAIAARDSVVILW* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01165 138 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 Pfam Peroxidase 43 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Rops9g01165 138 Gene3D - 26 138 - -
Rops9g01165 138 PANTHER PEROXIDASE 72-RELATED 23 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 SUPERFAMILY Heme-dependent peroxidases 25 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g01165 138 ProSiteProfiles Plant heme peroxidase family profile. 25 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01165 Rops-Chr9 19151657 19154541 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01165 3 137 Peroxidase AT5G58400 57.037 2.92e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01165 K00430 - gmx:100811396 226.098