Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01160 ATGGCACTTTCTTCTTCTCGTTCTTCTTCAGCCATTTTTGCTTTAGCTTTGCTCATGTTTTTGCTTATGGGGAGTTCTTCTGCTCAACTCTCTGAGAACTTCTATGTTAAGAAGTGTCCCAAGGTTTTCAATGCTGTAAAATCTGTTGTTCAATCTGCTGTGGCCAAAGAACCTCGCATGGGAGGATCTCTCCTTCGCCTCTTCTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAGTGCTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCAGGTCCCAACAAAAATTCTTTGAGAGGTTTTGAGGTCATTGATGCCATAAAGTCTAAGGTGGAGAAAGTATGCCCCGGTGTTGTGTCATGTGCTGATATTGTAGCCATTGCTGCTCGTGACTCTGTTTCAATTCTTGGAGGGCCTTTTTGGAAGGTTAAACTTGGAAGAAGGGATGCCAAGACAGCCAGCCTCAATGATGCAAACAGTGGTGTGATTCCTCCTCCTTTTTCTACCCTTAGCAACCTTATCTCAAGGTTTCAAGCTCAAGGGCTCTCAACCAAGGACATGGTTGCCTTATCTGGAGCGCACACAATTGGGAAGGCAAGGTGTACTACTTTCAAAGGTCGTGTATACAATGATACCAATATTAACAGCTTATTTGCTAAGGCAAGGAAGAGGACTTGTCCAAGGACTAGTGGCACATTAAAAGACAACAATGTAGCAGTCTTAGACTTCAAAACTCCTAACCATTTTGACAACAGTTACTACAAGAACCTCATCGACAAAAAGGGACTCCTTCATTCTGACCAAGTGCTCTTCAGTGGAGGATCTACTGATTCATTGGTTAGAACTTATAGCAATAATCCGAAGGCCTTTGCATCTGATTTTGTTACTGCCATGATTAAGATGGGAAACATCAAACCTTTAACTGGGTCTAAAGGGCAGATTAGGAAGCAATGCAGGAGAGCCAATTAG 981 0.4271 MALSSSRSSSAIFALALLMFLLMGSSSAQLSENFYVKKCPKVFNAVKSVVQSAVAKEPRMGGSLLRLFFHDCFVNGCDGSVLLDDTSSFKGEKTAGPNKNSLRGFEVIDAIKSKVEKVCPGVVSCADIVAIAARDSVSILGGPFWKVKLGRRDAKTASLNDANSGVIPPPFSTLSNLISRFQAQGLSTKDMVALSGAHTIGKARCTTFKGRVYNDTNINSLFAKARKRTCPRTSGTLKDNNVAVLDFKTPNHFDNSYYKNLIDKKGLLHSDQVLFSGGSTDSLVRTYSNNPKAFASDFVTAMIKMGNIKPLTGSKGQIRKQCRRAN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01160 326 FunFam Peroxidase 168 305 - -
Rops9g01160 326 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Rops9g01160 326 FunFam Peroxidase 33 172 - -
Rops9g01160 326 Gene3D - 33 323 - -
Rops9g01160 326 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Rops9g01160 326 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Rops9g01160 326 PANTHER PEROXIDASE 72-RELATED 24 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g01160 326 Gene3D Peroxidase, domain 2 168 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01160 Rops-Chr9 19088373 19091932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01160 28 326 Peroxidase AT5G05340 68.227 6.21e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01160 K00430 - gmx:100812478 479.559