Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01153 ATGCGGGAGATCGAACAGGCGGCGGCGGACGGCGCCGCCTTGTTCGGGAAATACGAGGTCGGGAGGCTCCTAGGTTGTGGGGCTTTCGCGAAGGTCTATCACGCTCGCAATGTAGAGACAGGGCAGAGCGTGGCGGTTAAGGTGATAAACAAGAAGAAGATAACAGGAACAGGGCTTGAATCTAACGTTAAACGCGAAATCTCAATCATGAGCCGTCTCCACCACCCAAACATCATTAAACTCCACGAAGTTCTCGCCACCAAAACCAAAATCTACTTCATCATGGAGTTCGCAAAAGGGGGTGAACTCTTCGCAAAAATCTCCAAGGGTCGTTTCTCGGAAAATCTCAGCCGTCGACATTTCCAACAGTTAATCTCCGCCGTCGGATATTGCCACTCACGCGGCGTGTTCCACCGCGACTTGAAGCCGGAGAATCTCTTACTAGACGATAAAGGGAACCTTAAAGTCTCCGACTTTGGACTCAGTGCGATGAAGGACCAGGTTAGTGTTGATGGGTTGTTGCACACGCTTTGTGGCACTCCTGCTTACGTGGCACCGGAGATTCTGGCGAAGAAGGGTTACGATGGTGCTAAGGTTGATGTTTGGTCTTGTGGGGTTATTCTATTTGTTCTTGTTGCTGGGTATCTTCCGTTTAATGATCCCAATTTGATGGTTATGTATAAGAAGATTTACAGTGGGGAATACCGGTGTCCAAGGTGGATGTCGCCGGAGCTGCGGCGGTTTCTGTCGCGGTTGTTGGATACTAACCCGGAGATGAGGATCACCGTCGATGAGATTCTCCGGGACCCTTGGTTTCGTAAAGGGTATGAAGAGGTGAAGTTTCACGAGGAGCATTTTGGGTCCAAGCTTGGTGATGGTGAAGACAATAAGGTGATGGATTTGAACGCGTTTGATATAATCTCGTTTTCTTCGGGGTTGAATATTTCACGGTTGTTCGGTGGTGACGCGGCGGAGGACGGTGAGAGGTTTATTTTAAAGGAGTCGCCGGAGAAGGTTGTTGAGAAGGTGGAGGCGGCGGCGAAGGCGGAGGGGCTGGCCGTGAGGAAGAAGAAGGATTTTGCGGTGGAGATTCAAGGGCTGAATGGTAATTTCTCCATTGAGGTGGAGGTTTACCGGTTAACGGCGGAGGTGGTGGTGGTGGAGGTGAAAAGGAGAGGTGGTGATGCTATTGCTTTTGAGGATGTTTGGAAGAAAAAGTTGAGGCATCACCTCTGTGATGCTACGACGTCGCATCGGCAACAAACTCAGTCTAACACGGTCTCCGCTGACTGA 1293 0.5058 MREIEQAAADGAALFGKYEVGRLLGCGAFAKVYHARNVETGQSVAVKVINKKKITGTGLESNVKREISIMSRLHHPNIIKLHEVLATKTKIYFIMEFAKGGELFAKISKGRFSENLSRRHFQQLISAVGYCHSRGVFHRDLKPENLLLDDKGNLKVSDFGLSAMKDQVSVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLVAGYLPFNDPNLMVMYKKIYSGEYRCPRWMSPELRRFLSRLLDTNPEMRITVDEILRDPWFRKGYEEVKFHEEHFGSKLGDGEDNKVMDLNAFDIISFSSGLNISRLFGGDAAEDGERFILKESPEKVVEKVEAAAKAEGLAVRKKKDFAVEIQGLNGNFSIEVEVYRLTAEVVVVEVKRRGGDAIAFEDVWKKKLRHHLCDATTSHRQQTQSNTVSAD* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01153 430 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01153 430 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01153 430 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 397 - -
Rops9g01153 430 Pfam NAF domain 301 356 IPR004041 GO:0007165
Rops9g01153 430 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Rops9g01153 430 Gene3D Transferase(Phosphotransferase) domain 1 9 301 - -
Rops9g01153 430 CDD CIPK_C 302 412 - -
Rops9g01153 430 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Rops9g01153 430 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Rops9g01153 430 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01153 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Rops9g01153 430 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Rops9g01153 430 FunFam Non-specific serine/threonine protein kinase 8 301 - -
Rops9g01153 430 Gene3D Kinase associated domain 1, KA1 302 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01153 Rops-Chr9 18997744 18999370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01153 1 417 CBL-interacting serine-threonine protein kinases AT2G30360 64.419 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops9g01153 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01153 - - gmx:100813555 591.652