Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01152 ATGGGGTGTTGTGTCTCAACAAGCAATCAAAGTACTTGTAGTAGCAGGAGCAATGGAGAGACAGTCTCTTCATCCCGCCTAGAAGCTGGATTACGTGGTCAAAAGAAAGCAAGGAGAACATTCTCACGATCATGTTATCTCACCGCACTGGTTACCATCCTCGACCAAACAGGATTTTCACTAATGGAAAGAGCGATCTTCTTGCATATTTACACAAAGAAGGTCGTAAGGGATTTCATGTCGAGAAGATGTGATCTTACTGTGGTGTCTTTGATGGCCATGGTTCACAAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAATGACTTGATGGTAGCAATTCAATTGATTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCTGAAAGAATCAAACGGTGCAAGGGTAGGGTATTTGCACTGCAAGATGAGCCAGAAGTTCCTAGGTTCATTGTTCTTGCCTCGGATGGGGTGTGGGATGTTTTGAGCAATAAAGAGGTGGTGGAGATAGTATCTTCAGCACCAAGTCGATCATCAGCAGCCAGGGTTCTGGTGGATTCTGCTGCACGAGAGTGGAAACTTAAATATCCTACTTCAAAAATGGATGACTCAACCATTCGGGTAATCCGGTTGAGTCGAGATGATGGTCAAAAGTCTGAGCCATCTTTGCAAAGGAACTTTACTGTGAGATCCTCAAAAGAAACTGAGAAGACCCATGGAGGAGGAGTATCTGTTGATGTTGTTGAAGATGGAACATCATCAGCTGAAGATCAAAACTGGTCAGGTTTGGAGGGTGTCACCCGAGTGAACTCATTAGTTCAACTTCTTAGACTTCCTACGTTAGTTGGGATATTTTGTTGTAAAACCTGTTGCAACACAGTTAATTCAACAAAGAAAATCTTTCTTTGGTTAATTACTTGTAGTAAAACGATGCTTAATTAA 972 0.4239 MGCCVSTSNQSTCSSRSNGETVSSSRLEAGLRGQKKARRTFSRSCYLTALVTILDQTGFSLMERAIFLHIYTKKVVRDFMSRRCDLTVVSLMAMVHKGSNLFMGNIGDSRAIMGSKDNDLMVAIQLIVDLKPDLPREAERIKRCKGRVFALQDEPEVPRFIVLASDGVWDVLSNKEVVEIVSSAPSRSSAARVLVDSAAREWKLKYPTSKMDDSTIRVIRLSRDDGQKSEPSLQRNFTVRSSKETEKTHGGGVSVDVVEDGTSSAEDQNWSGLEGVTRVNSLVQLLRLPTLVGIFCCKTCCNTVNSTKKIFLWLITCSKTMLN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01152 323 Gene3D - 152 230 IPR036457 -
Rops9g01152 323 Gene3D - 22 151 IPR036457 -
Rops9g01152 323 ProSiteProfiles PPM-type phosphatase domain profile. 2 221 IPR001932 -
Rops9g01152 323 SMART PP2C_4 1 219 IPR001932 -
Rops9g01152 323 MobiDBLite consensus disorder prediction 225 258 - -
Rops9g01152 323 CDD PP2Cc 24 221 IPR001932 -
Rops9g01152 323 MobiDBLite consensus disorder prediction 1 29 - -
Rops9g01152 323 SUPERFAMILY PP2C-like 78 222 IPR036457 -
Rops9g01152 323 MobiDBLite consensus disorder prediction 1 28 - -
Rops9g01152 323 Pfam Protein phosphatase 2C 95 149 IPR001932 -
Rops9g01152 323 Pfam Protein phosphatase 2C 158 199 IPR001932 -
Rops9g01152 323 PANTHER PROTEIN PHOSPHATASE 159 220 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01152 Rops-Chr9 18991793 18994625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01152 55 289 PP2C-type Phosphatase Gene Family AT1G03590 48.534 1.95e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01152 - - gmx:100798340 270.396