Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01147 ATGGGTAACAACAGGTTCAAATTGTCAGATATGATACCAAATGCATGGTTTTACAAGCTTAAAGATATGAGCAGATCAAGGAAGAGAAATGGTCCTCATGTTATGAAGAGCAAGGTAACCTCACCAACAACATCTCAAAGATCACTACCAAGATATTCACATTATTTTCCCACTGAACCAACTGGAGCTGGTAAGCTATTCAACACACCAATTCACACCAAAGATTTGGATATTCCATTCACTGATTCACCAAGAAGGTCATCAAAGAGAAGAGCTAGGAGAAAAACCATTTACAAGCCTTCTCCATCAGTTGTCTCCTCTTCTTTTAGAGCCAGTTCCAATTATGATTCCACAAATAATTGGACTAAGCAATGTCAAATTCAGTCACCAGATTATGATGTGTCTTCCATTGAAAGTTCTTCTGAATCTGATCTCCATGAATATGTTTATTCTGAGTCTGATTGTGATAGCTTTTCTGTTCCTGATTTGCTTAATGGAATAGCCTCTAATTGCAGTTGCAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAACAATGAATCCTTCCCTGGCAATTCTGAAAAGCTAGATGGGTTTGAAGCAATTCCACAGCCAGGTCTAGCTCCAATATTGACAAAGCCAATGAAGTTTGATGATAAGATCATTGAAGGCACTGAATCCGGAAGTTCAACCGAATCGGATGATCTACACATTGATCCATCTTTCTCTATCAAGATTAGCAAAGAGGAAGGCAGTAGAACACAAAGAAGGAGAAAAAGCAGTCATATAGCTAGAAAGTCCTCTCCTAATTCTACAGGTATAAGGCTTAGAGTCAATTCTCCAAAACTGGCTAGCAAGAAAATTCAAGCTTGTGCAAGAAGGAGTGTGTCATCCAATGCAAACAAAGCTTCAAGGAATACAGGCTTTCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGACCCACAAAGTGACTTCAGGAAGTCAATGGTGGAGATGATTGTGGAGAACAATATCTGGGCATCAAAAGATTTGGAGGACTTACTTGCCTGCTATCTTTCCTTGAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTAGACATGGCTCAACTTAGAATGTAA 1149 0.3864 MGNNRFKLSDMIPNAWFYKLKDMSRSRKRNGPHVMKSKVTSPTTSQRSLPRYSHYFPTEPTGAGKLFNTPIHTKDLDIPFTDSPRRSSKRRARRKTIYKPSPSVVSSSFRASSNYDSTNNWTKQCQIQSPDYDVSSIESSSESDLHEYVYSESDCDSFSVPDLLNGIASNCSCRVSSSTNDIIIDMNNESFPGNSEKLDGFEAIPQPGLAPILTKPMKFDDKIIEGTESGSSTESDDLHIDPSFSIKISKEEGSRTQRRRKSSHIARKSSPNSTGIRLRVNSPKLASKKIQACARRSVSSNANKASRNTGFPDGFAVVKSSFDPQSDFRKSMVEMIVENNIWASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWLDMAQLRM* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01147 382 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 377 IPR038933 GO:0045892
Rops9g01147 382 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Rops9g01147 382 NCBIfam uncharacterized plant-specific domain TIGR01568 315 377 IPR006458 -
Rops9g01147 382 ProSiteProfiles OVATE domain profile. 317 376 IPR006458 -
Rops9g01147 382 MobiDBLite consensus disorder prediction 36 52 - -
Rops9g01147 382 MobiDBLite consensus disorder prediction 27 54 - -
Rops9g01147 382 Pfam Transcriptional repressor, ovate 321 377 IPR006458 -
Rops9g01147 382 MobiDBLite consensus disorder prediction 226 280 - -
Rops9g01147 382 MobiDBLite consensus disorder prediction 226 259 - -
Rops9g01147 382 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01147 Rops-Chr9 18916407 18917689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops9g01147 Ovate 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01147 - - gmx:100780926 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02271 11 38216168 38219811 Rops9g01147 9 18916407 18917689 PCT