Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01146 ATGTATTCCAAGAGAGAGAACAAGGAGGATTGCAAGTCAGAACACCGTTATGTGGAAACTGACCCAACTGGTCGCTATGGCAGGTTTGAAGATGTTCTTGGACAAGGGGCAATGAAGAAAGTGTACAAAGCAATTGATGAGGTCCTTGGAATAGAGGTAGCGTGGAATCAAGTCAGACTCAATGAAGTACTTCACACCCCGGATGATTTGCAGCGGCTTTACTCAGAAGTTCATCTCCTCAGTACCCTAAAGCACCAATCCATCATACGATTCTATACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACTTCAGGGACTCTGAGAGAATACCGGAAGAAATATAAGCGAGTCAGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTGCATGGCCATGATCCACCAGTAATCCATAGGGACCTCAAATGTGATAATGTGTTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGACTGGCTGCAATTCTCCGTGGCTCCCAGTCAGCTCACAGTGTTATAGGTACACCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTATTGGAAATGCTTACTTCTGATTATCCATACAGTGAATGTTCTAATCCAGCTCAGATCTACAAGAAAGTGACATCGGGGAAGCTACCAAAGGCGTTTTTCCGGATTGAAGACATGGAAGCACAAAAGTTTATTGGAAAATGCCTAGTACCTGCAGCAAAGAGACCATCAGCGAAAGATTTGTTGCTTGACCCTTTTCTTGTGTCTGATGATTCATCATCAAAATTAAAGTTTGCAATTCAGAAGCCAATTTTGAATGACAGTGAGATGGAAAGACTGCAATTGAGTGATGATTTTTTTAGGACTGAAATGAAAGTAATAGGGAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGGATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGACATTCTCACTGACACCCCCATTGATGTTGCAATGGAGATGGTAAAAGAATTGGAGATTGCTGATCGGGATCCTTTTGTTATTGCAAATATGATTGATCGAGAGATATCTGCTCTGCTACCACATAGAAGGAAAAATAACTGTTCAGATGCCTTCCATACATTCAATTATCATGATGATGATGGTGATGAACCTCATCATCATTTCCGTTCATTCTCTTCTGGTTCATCATTCCAAGAATCAATACCAGATTTAGTCAGTAAAGCTGAGGAAATATCAAGCGGAAATTATTGGCTCCATGATGATTTGCATGATGATACCAGTTCACGATGCTCATCACAAGGGACATACTCCAACTTGAATTACTATTCTGTGGATGACCAGGAATACAACATGGCTTCTGTCAGAAAAGATAAGCTTCCCATCATAAAGAGTCACAAGGGAACAAGGTTTTCCCCTTGTGAAGAATCAAGCAATTACAACCAGTGTAAAGTTCTAGCAGGATCACAGGCTCATTCTACTAGTAGAAGTAAGATAATGATGAACAATCGTAAATTGACAAGGAACAGGTCATTAATTGATGTAAGGAGCCAATTATTACACCGATCACTGGTTGAGGAGGTAAACAAAAGAAGGCTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGTCACCTTATGATGGTTCCACAAAATAG 1770 0.4023 MYSKRENKEDCKSEHRYVETDPTGRYGRFEDVLGQGAMKKVYKAIDEVLGIEVAWNQVRLNEVLHTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFVTEMFTSGTLREYRKKYKRVSIQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPKAFFRIEDMEAQKFIGKCLVPAAKRPSAKDLLLDPFLVSDDSSSKLKFAIQKPILNDSEMERLQLSDDFFRTEMKVIGKLNPEDDTIFLKVQISDKDGSVRNVFFPFDILTDTPIDVAMEMVKELEIADRDPFVIANMIDREISALLPHRRKNNCSDAFHTFNYHDDDGDEPHHHFRSFSSGSSFQESIPDLVSKAEEISSGNYWLHDDLHDDTSSRCSSQGTYSNLNYYSVDDQEYNMASVRKDKLPIIKSHKGTRFSPCEESSNYNQCKVLAGSQAHSTSRSKIMMNNRKLTRNRSLIDVRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQSPYDGSTK* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01146 589 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Rops9g01146 589 SUPERFAMILY Protein kinase-like (PK-like) 29 319 IPR011009 -
Rops9g01146 589 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Rops9g01146 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Rops9g01146 589 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01146 589 CDD STKc_WNK 25 285 - -
Rops9g01146 589 Gene3D - 326 402 - -
Rops9g01146 589 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Rops9g01146 589 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Rops9g01146 589 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01146 589 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01146 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01146 Rops-Chr9 18907491 18911875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01146 17 589 MAP Kinase Kinase Kinase AT5G58350 61.301 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops9g01146 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01146 K08867 - gmx:100272203 967.607