Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01142 ATGCAAGATCCACCTTCAAACCCTAATTCCAATCTCAATCCCAATCCTCACAATGCCAACACCGCTTCCCGATTACCGCCAATTCCGCCGTACACGGCCGCGACCACCGCCGGGGCCGGCTCTTCCTCGTCTTCATCTTCGCTGTTCTTGCGCTCCGGCGGCAATGGCGGGTCCCACCACCGGAGAGCACATTCGGAGGTCAGTTTCCGGTTGCCGGACGACATGATGGACCTGTCGTCGTCCGATCCGTTCACCGGCGGGTCGTCGACAGCGAGCATGGAGGAGATTGGATCTGAAGACGACCTGTTCTCCACTTACATTGACATGGACAAGCTCGGAGGGGCTAACGGGTCGGGTTCCGCCGGAAACGGAGCGGATCCAGGTGGGAACGGTGAACCGGAGAAGAGTCCGGCGAGGCCGAGGCATAGGCACAGTAGCTCCGCCGATGGTTCTTCTTCGTTTGGGGAAATTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTTTGGACAATTGATCCCAAACGTGCCAAGAGAATACTTGCAAATCGGCAGTCTGCTTCTCGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCTACAACTCTTTCTGCTCAACTGACACTATACCAGAGGGACACAACAGGTCTAAGTACTGAAAACACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAACTTCGCGATGCTCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGGCTTAAGGTTGCTACTGGGGAGATGATAAGCCACACTGAATCTTTTAATCTGGGAATGCACCAGATGCAATTTACAGAATCAAATTTCATTCCAATCCCCCTACAATCTGGTCCTGCTGATCACCAGAACATCCAGTTGCCTCCATTTGGTCACGCTCCATCTAACATGCCAACTCATCATTTGCGACAAACAAATTCTCATCCATTTTCAGAAATGATGCAAAATGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACTGTCGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACTACATTTTGA 1131 0.5057 MQDPPSNPNSNLNPNPHNANTASRLPPIPPYTAATTAGAGSSSSSSSLFLRSGGNGGSHHRRAHSEVSFRLPDDMMDLSSSDPFTGGSSTASMEEIGSEDDLFSTYIDMDKLGGANGSGSAGNGADPGGNGEPEKSPARPRHRHSSSADGSSSFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSASRSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMISHTESFNLGMHQMQFTESNFIPIPLQSGPADHQNIQLPPFGHAPSNMPTHHLRQTNSHPFSEMMQNDQLGRLQGLDISSKGSTVVKSEGPSLSASESSTTF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01142 376 Gene3D - 177 229 - -
Rops9g01142 376 MobiDBLite consensus disorder prediction 355 376 - -
Rops9g01142 376 FunFam probable transcription factor PosF21 177 230 - -
Rops9g01142 376 MobiDBLite consensus disorder prediction 1 22 - -
Rops9g01142 376 SMART brlzneu 174 238 IPR004827 GO:0003700|GO:0006355
Rops9g01142 376 MobiDBLite consensus disorder prediction 81 95 - -
Rops9g01142 376 Coils Coil 194 221 - -
Rops9g01142 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 239 IPR004827 GO:0003700|GO:0006355
Rops9g01142 376 SUPERFAMILY Leucine zipper domain 178 229 IPR046347 GO:0003700|GO:0006355
Rops9g01142 376 MobiDBLite consensus disorder prediction 1 102 - -
Rops9g01142 376 Pfam bZIP transcription factor 178 233 IPR004827 GO:0003700|GO:0006355
Rops9g01142 376 Coils Coil 242 273 - -
Rops9g01142 376 CDD bZIP_plant_RF2 179 228 IPR044759 GO:0003700|GO:0006355
Rops9g01142 376 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 340 - -
Rops9g01142 376 MobiDBLite consensus disorder prediction 35 53 - -
Rops9g01142 376 MobiDBLite consensus disorder prediction 114 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01142 Rops-Chr9 18835451 18838702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01142 1 376 bZIP Transcription Factor Family AT2G40620 51.932 1.73e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops9g01142 bZIP_1 3.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01142 - - gmx:778172 498.819