Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01131 ATGAAGTTCTACTCCCCTCCAATGCACACTGTTCTTTTTATCATTGTTATTCTTTCTCCTGTCGTTATTGCTGACCTAAGTTCTGATAAGCAAGCGCTTCTTGATTTTGCTGCTGCTGTCCCCCATCGTCGGAACCTTAAGTGGGATCTAAATACCTCAATCTGTACATCTTGGGTAGGCATCACTTGTAATCCAAATGGCACTCGTGTTGTTTCTTTCCGACTACCTGGAGTTGGACTAGTGGGCACCATTCCAGCCAATACACTTGGCAAGATTGACTCACTCAAAACTATCAGCCTTCGCTCCAACCTACTCAGTGGAAGTCTACCTCCTGATATTACTTCTCTTCCTTCTCTACAATATCTTTATCTTCAGCATAATAACCTTACTGGTGGTATACCTACCTCATTGTCAGCCCAACTCAATGTACTTGTTTTGTCATACAATTCCTTAACTGGTGGCATTCCAAAGACATTACAAAACCTAACACAACTAACTAGATTGAGCCTCGAGAACAACTCCCTGTCTGGACCGATTCCTTATCTTAATGTCACTAAGCTCAAGCATTTGAATTTGAGCTATAACCATTTGAATGGCTCTATCCCTGAAGCTCTTCAGATTTTCCCAAATTCTTCCTTTGAAGGGAACCCTCTCTTATGTGGATTACCTCTAAAGTCATGCTCTGCAGTCCCTCCTACATCTCCTCCTGTGACTCCAGCCCCATCATCACCTCTGGTAAGGCACGGCTCCAAAAATAAACTCAGTAAGGTAGCTATCATTGCAATTGCTGTTGGTGGAGCTGTGCTGTTGTTTTTTGTAGCTCTTGTCATTTTCCTTTGCTGTTTAAAGAAAAAAGATGATGGAAGCTCCAGAGAAAATAAAGGGAAGGGTCCTAGTGGTGGAAGGACTGAAAAGCCAAAAGAAGAGTTTGGAAGTGGAGTGCAAGAACCTGAGAAAAACAAATTGGTTTTCTTTGAGGGCTGTTCTTATAATTTTGATCTTGAGGATTTGCTAAGGGCTTCAGCTGAGGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCCATCTTGGAGGAGTCAATAACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTAGGCAAGAGGGACTTTGAGCAGCAGATGGAGGTTGTAGGAAGAATTGGACAGCACCCAAATGTTGTGCCACTTCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTTTATGACTATTTCCCAAATGGCAATCTATCTACCCTCTTGCATGGTAATAGGGCTAGTGGAAGAACTCCATTAGATTGGAACTGTAGAGTAAAAATCTCTCTTGGAATAGCCAAAGGAATTGCTCACATACATTCAGTTGGTGGTCCAAAATTCACACATGGAAATGTCAAATCCTCAAATGTACTCATCAACCAAGAGAATGATGGCTGCATTTCTGACTTTGGCCTCACCCCACTTATGAATGTTCCTGCCAATCCTACTAGAGCAGCAGGTTATCGCGCTCCCGAGGTGATTGAAACTCGTAAGCACACTCATAAATCAGATGTGTACAGTTTTGGTGTCCTTCTCCTTGAAATGCTTACAGGAAAAGCACCACAACAGTCTCCAAGCCGTGATGACATGGTTGATCTCCCTAGATGGGTCCAATCTGTTGTTAGGGAGGAGTGGACAGCTGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCATGTGTGGCAAAGGTTGCAGATATGAGACCAAGTATAGAGGAAGTAGTGAGAATGATAGAAGAGATAAGGCAATCTGACTCAGAGAACCGGCCATCTTCTGAAGAGAATAAATCCAAGGACTCAAATGTTCAAACTCCATAG 1905 0.4241 MKFYSPPMHTVLFIIVILSPVVIADLSSDKQALLDFAAAVPHRRNLKWDLNTSICTSWVGITCNPNGTRVVSFRLPGVGLVGTIPANTLGKIDSLKTISLRSNLLSGSLPPDITSLPSLQYLYLQHNNLTGGIPTSLSAQLNVLVLSYNSLTGGIPKTLQNLTQLTRLSLENNSLSGPIPYLNVTKLKHLNLSYNHLNGSIPEALQIFPNSSFEGNPLLCGLPLKSCSAVPPTSPPVTPAPSSPLVRHGSKNKLSKVAIIAIAVGGAVLLFFVALVIFLCCLKKKDDGSSRENKGKGPSGGRTEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESITVVVKRLKEVVVGKRDFEQQMEVVGRIGQHPNVVPLRAYYYSKDEKLLVYDYFPNGNLSTLLHGNRASGRTPLDWNCRVKISLGIAKGIAHIHSVGGPKFTHGNVKSSNVLINQENDGCISDFGLTPLMNVPANPTRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPSRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVADMRPSIEEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01131 634 SUPERFAMILY L domain-like 33 226 - -
Rops9g01131 634 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Rops9g01131 634 Gene3D Transferase(Phosphotransferase) domain 1 415 633 - -
Rops9g01131 634 FunFam pollen receptor-like kinase 1 307 414 - -
Rops9g01131 634 Pfam Leucine Rich Repeat 186 206 IPR001611 GO:0005515
Rops9g01131 634 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Rops9g01131 634 ProSitePatterns Protein kinases ATP-binding region signature. 345 376 IPR017441 GO:0005524
Rops9g01131 634 MobiDBLite consensus disorder prediction 286 314 - -
Rops9g01131 634 Pfam Protein kinase domain 342 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01131 634 MobiDBLite consensus disorder prediction 608 634 - -
Rops9g01131 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 415 622 - -
Rops9g01131 634 ProSiteProfiles Protein kinase domain profile. 339 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01131 634 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Rops9g01131 634 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Rops9g01131 634 MobiDBLite consensus disorder prediction 608 625 - -
Rops9g01131 634 SUPERFAMILY Protein kinase-like (PK-like) 343 617 IPR011009 -
Rops9g01131 634 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Rops9g01131 634 PANTHER OS05G0588300 PROTEIN 12 622 - -
Rops9g01131 634 Gene3D Ribonuclease Inhibitor 182 228 IPR032675 -
Rops9g01131 634 Gene3D Phosphorylase Kinase; domain 1 307 414 - -
Rops9g01131 634 CDD STKc_IRAK 345 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01131 Rops-Chr9 18550073 18555071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01131 3 632 Receptor kinase-like Gene Family AT5G58300 68.446 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g01131 Pkinase 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01131 - - gmx:100818344 1034.63