Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01130 ATGCTAACTAACACGTGTTGTTGCTTGTTATCTTTGCTTCTATATATATATTATGCGCCTGCAAGTTATAAGAACATTTTGCTTGGCTTTTGTTGTCTTCTTCCCGTTCTAAATCTTCTGGTGGAAAGGGGGAAGAAAAGCAACCTTCTTATTAGTTCAGGAGAGACGTTTAAGAGGTGTGGTGATTTCTGTGTTCCTGTGATGTATCTCTCAAAGGGTTGTAGGTGTCAAGTTGTTCTCTGCTTTTTGTTCTGCTCTTATTTCCTATTGGTTACTGCTCAGAACACTGACCCTGTTGAAGTTGACGCATTGAGAGCCATAAAGGAAAGGTTGAATGATATTAATGGAAATTTGAGCAAGTGGGGTAGTGGAGATCCTTGTACATCCAACTGGACTGGGGTTGTATGCTCCAATACAACATTGAATGATAGCTATCTACATGTTCTACAATTGCAACTACTGAACATGAACTTGTCTGGAACCTTGGCACCAGAGATTGGCAGCTTATCTCATCTGGAAATATTGAGCTTTATGTGGAACAACATAAGTGGGAGTATACCAAAGGAAATTGGCAATATCAAAACTTTAAAACTCTTGCTCCTGAATGGAAATAGCTTAACAGGTCAGTTGCCAGAAGAGCTTGGCAATCTTCCAGTCCTGAAAAGAATACAAATCGATACGAACCATATTTCAGGACCTATACCTTCATCATTTGCAAACCTTAACAGCACACGACACTTTCACATGAACAACAATTCACTTAGTGGGCAAATCCCACCACAGCTTTCTCGCTTAGGAAGCCTTATTCACCTTCTACTTGACAACAACAATCTTTCAGGACATCTCCCCTCTGAGCTCTCTGAGATGCCAAGCTTAAAGATACTTCAACTTGATAACAATAACTTTGAGGGAAATAACATTCCAGATTCTTATGGCAACATGTCAAGATTATTGAAATTGAGCCTTAGGAACTGCAACTTGACAGGACCAATTCCTGATTTAAGCAGAATACCACACCTTGGTTATCTTGACCTCAGTTTCAATCAGTTGAATGACTCAATTCCTACTAATAAGCTTTCAGAAAATATCACAACCATTGATTTATCAAACAACAAGCTTACTGGAACTATTCCGTCCTACTTTTCTGGTCTTCCTCGTCTTCAGAAATTGTCAGTTGCAAACAATTCAGTGAGTGGCAATGTACCATCTACAATTTGGCAGAACAGGACTTTAAATGGAACAGAAATACTTCTCTTGGAGATGCAACACAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTGCAAATGTCACACTCCTGCTTGAGGGGAATCCCTTATGCTTAAATAACAACACCTTAGTTCAGTTCTGTGGATCTGGAAGTGACAATGACATCAATGGTAACTTCAACGTTAGCTGTCCAAGTCAACCATGCCCCCCTCCTTATGAATACAATGTGGAGTGTGTCTGTGTAGCTCCTTTGCTTGTTCATTATCGGTTGAAAAGTCCAGGATTTTCAGATTTCCGTACATATGTGAAACCATTTGAGAGCTTCCTGTCAAATAGTCTTAATATACATAGTGATCAGTTATACATTGAAAGTTTTACATGGGAAGAAGGGCCTCGATTGAAAATGCATTTGAAGCTTTTTCCTGTATATGCTGATAATAATAGAAGCACTCATACTTTCAATACAAGTGAGGTTGCTCGGATCAGAGACATGTTCAGAGAATGGGATATCGATGACAGTGACTTGTTCGGGCCTTATGAACTTCTAGACTTTATTCTACTAGATCCTTACAGGGATGAGACTGGCACATCTTCAAGTTCAGGGATAAGCAAAGGTGCACTGGTTGGAATAATCTTAGCTGCAATTGCCGGTTCAGTTATAGTATCTTCAATTGTTACCATTCTTATATTGAGAATACGCTTGAGAGATTACAGTGCACTTTCCAGAAGGCGTAATGTATCTAGGATCTCAATGCAAATTGATGGTGTAAGATCATTCGTTTATGAAGAAATGGCCTTGGCTACAAACAATTTCAGTGAATCTGCTCAAGTTGGACAAGGGGGGTATGGGAAGGTTTATAAAGGTCATCTTCCAGATGGCACTGTTATTGCCATAAAACGTGCACAAGAAGGTTCACTGCAGGGTGAGAGGGAGTTCCTTACAGAAATACAATTGCTATCAAGGTTACATCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGAACGCTAAGGGATCACCTTTCCGCTTCTTCAAAAGAACCTCTTAGTTTTTACATGAGATTGAAGATTTCTCTAGGGTCAGCTAAAGGCCTTCAGTATCTACACACAGAAGCTGATCCTCCAGTATTCCACAGAGATGTTAAGGCCAGTAATATATTATTGGACTCTAAGTTCACAGCTAAAGTTGCTGACTTTGGACTTTCAACACTTGCTCCAGTTCCAGACGTTGAAGGCAATGTGCCTGGTCATGTATCTACAGTTGTAAAAGGGACCCCGGGTTATCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAAATGGTGACCGGAAGGCCACCAATCTTTCATGGTGAAAATATTATTAGACAGGTTAATTTAGCATACCAATCTGGTAGAATACTTTCAGTTATTGATAAACGTATGGGGTCTTATTCTTTTGAGTATATGGAGAAATTCTTAACTCTAGCCTTAAGGTGTTGCAAAGATGCACCAGATGATAGACCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAATATCTGGTCTATGGTACCTGAGTCCAATGTCAAGGGAGTTGAATATGCTTCAAGTGATTCAGGAAAAATGTTTAGTTCACAACCTTCATCATCTTCTACTACAAAGACTCCTTTTATTTCAGGAGATATGTCAGGTAGTGACCTTTCTTCTGTTTATAGTACTAATATTGTTTATTCTTTGTCCGAAAACAGTATCCAACCTGAATCAGTAACTACTCCTACTTTTGTTTGCAAATACAACAGTATCCATCAAAGGATTGTGTCATTTCAAATGGAGGATATTGGTTTTTCCATCATAGCAAAGATTGCAGAATATACGGTGGATCCAATTTTACACCATGCTCAATACTTGTGTTGTTTCAACAACTTTGCTGGGAATTTCCCAAATGCAAAAAGAGACTTAGAATTGACCCGAGACAGTGTGATGGAAAGAGTTAAAGAAGCAACTAATAGGACTGAAAAAATTGAGCCAACTGTTGAAAAGTGGCTGAAAGATGTGGAGAATGTCCTACAACAGTTAGCCAAATCCTTGTTCTTGCTGTGCTGTATATTCCCAGAGGATCATGAAATTGAGTTGGAAGATTTATTTAGATTTGGAAAGGGATTGGGGCTAACTGGGACTTTTGGAACAATGGATAAAGCAAGGAGGGAGATGCATGTAGCTATTAACATCCTCATGGATTCTTGTTTGTTGCTGCATGCCAATAAAAAAGAAAGGGTAAAAATGCATGACATGGTTCGTGATGTAGCCTTGTGGATAGCATCTGAAAAGGGTCAGGCAATTTTGGTAAGTAATGTAATGGATCCAAGACTCTTGGTAGAGGATGAAACTATAAAAGATAAGAGAGCAATATCTTTATGGAATTTGAAGAATGGTCAACTTCATAATGGTCAATTGAATTGTCCCATCCTTGACATTCTCTTACTTCATTCTCCAAATGTTGGCTTTGAAGTATCAAATGCATATCTTGAAGGGATGAAAATGCTTAAAATCTTGGCCTTCTTAAGATTTGGCTATAAGTGGGACTTATATTTGTCAAGGAGCACTAATACATCAAAGTTTACTTTGTCAGTGCAAAAGTTTATTGAGTCAGTGAAAAATCTTCGAACTCTATGCTTGAGAGGTTATAAATTAGGCGACATCTCCATTTTGGAAAGCCTACAAGGACTTGAGATTCTTGACTTGCGTGGTTCCTCTTTTGAAGAATTGCCAAATGGAATTGTAGCTCTGAAAAGATTGAAGCTTCTGGATTTGTTCAACTGTTGGATTGAGAAAAATAATGCTTATGATGTAATAGGAAGATGTTTGCAACTAGAGGAATTGCATCTCTTTTTACCGACAGTTGAAGAGGATTTTCCGTATAATGTCTCTTTTGAAAGATTACGGAGGTATGTTGTTCTGATCAATGCCAAATTCGATTTTGTTCATAGATTGGACTTTCCATATATGACGCAGATTGAAATTTTGGATGAGCATAGACCGTCAAGAGCTTTTTGCATAAATCATTTCAATGCTCCTGCTCAAAGTTTTATGTCATTACCAATCAAAGATCTCTACCAAAGAGCAGAGGACCTTCATTTGATACACCTTCAGGGAGGTTACAAAAATGTAATCCCAACCATGGATCAAGAAGGCATGAATCAGTTGATTTTCCTAATACTTGAATATTGTCCTGAGATAGAATGCCTTTTTGATGGTACTATCATTACCAACACCAATGATCCTCATGTTGATTTGCTTCAAACAGAAGCTGTGTTCTCCAGCCTAGTTACCTTAAGGCTGCGTAGCATGTCTGGCCTTCAAGAAGTGTTTCGCGATCCCTCTTCGCGATGCTCCCTCAAAAATTTAGAACAACTGAACATAGAAAATTGTACACAGTTGTACAACATATCCTTTCCAAGAAACTCAAAGCTATGCAATCTTAAGTTCTTTAGAATAGAAAGGTGCCAAATGCTAACTTCTCTCCTTACACTGTCCATTGTCCAAACTCTAGAGCAACTAGAGGTACTACAAATATATAAATGCAGTAAATTAAAACATATAATAGGAGAAGGTGAAGAAAAAAGGTATATTGATTATGTTAGCAATCAAAGTCATTCCTCTTTGGTGCTCCAAAAATTAAGGATTATTCACATTGAGGGGTGTGATAAGTTGGAATATATATTCCCTGTGTGTTTTGCTCAAGGTCTAGCAAGATTGGAAATGCTGAGCATTAAAAACAGCTTTGATTTGAAGTATGTATTTGGCACAGAAAAGGAACATCATCTTTCAGTGTACAAACATCACAATCACGAAGAGACTAATATTAAGATAAATTTGCTTAACTTGAAAACTCTCAGACTGGATTCATTATCAAATCTTGTTGACATTTGGCCTGAATATTGCCATCCATGTTTACCAAATTTGGAAGTGTTGCGATGCAATAAATGTCCAAGATTGTCCAACTCTTCTGTGCGTAAGGTGGTGATTGATTCAGATTTGCAGCAAGACACAACTGCAATGGAGAAGGAAATACTATGGTTGGCTGCCACAACCTTCAACCAGTTGTGTGAACAAAGGTTTCCTCCAGAGTTAAAAGCTGTCCTCAACTTAAGACTCTTTGTTTTGACTCATCTTAGAGTAGAAGGAATTTTTCAACTCCAAATCAGAGAACCTGGAAGCAATAGAGAACTAGTTCCATTGACCTTGGATCTATATGGTCTCAAATTAATTAATCTACCTCAGCTCAGGTTCATATGGAAGGGCCCCACAGAATTTCTAAGCCTCCAAATGCTTAGATCTTTCCATGTAGATGGCTGCCCAAAATTGAAAAACATCTTCTCCCCTACCATTGTTAGAAGTTTACCAAAGCTGACCCAACTGAAAATATTCAACTGTGAGGAATTAGAGCAAATATTTGATTCAGGTGATGCACAAGAACTCAAAAGCTTGTATACGTGTTCCCAACAAGTATGCTTCCCAAAACTGTGGAACATTGAAGTTCTAAAGTGCAATGAGTTAAAATGCCTTTTCTATAATTTCATGATTGGTCATTTCCCCAGTCTAAAAGAATTGAAAATAGAAGAGTGCATTCAGTTAGAGAAGGTTTTTGCCTTTGAACATGAGGCTGATGATGAAGTTCAAGAAGTGACTGGTGAGGATGGAGAGCAAGTACTGCTACAGAATTTGGAAAGACTATCACTCAAAAGCTTGCCAAACTTCAAAGAGATTCACCATGGGTTCAAGTTAGAACAACATGTCAAACGTACCATTGAGGATTGCCCTAAATATTCTCCAAGAGCTTGA 6147 0.3831 MLTNTCCCLLSLLLYIYYAPASYKNILLGFCCLLPVLNLLVERGKKSNLLISSGETFKRCGDFCVPVMYLSKGCRCQVVLCFLFCSYFLLVTAQNTDPVEVDALRAIKERLNDINGNLSKWGSGDPCTSNWTGVVCSNTTLNDSYLHVLQLQLLNMNLSGTLAPEIGSLSHLEILSFMWNNISGSIPKEIGNIKTLKLLLLNGNSLTGQLPEELGNLPVLKRIQIDTNHISGPIPSSFANLNSTRHFHMNNNSLSGQIPPQLSRLGSLIHLLLDNNNLSGHLPSELSEMPSLKILQLDNNNFEGNNIPDSYGNMSRLLKLSLRNCNLTGPIPDLSRIPHLGYLDLSFNQLNDSIPTNKLSENITTIDLSNNKLTGTIPSYFSGLPRLQKLSVANNSVSGNVPSTIWQNRTLNGTEILLLEMQHNQLTSISGSTNLPANVTLLLEGNPLCLNNNTLVQFCGSGSDNDINGNFNVSCPSQPCPPPYEYNVECVCVAPLLVHYRLKSPGFSDFRTYVKPFESFLSNSLNIHSDQLYIESFTWEEGPRLKMHLKLFPVYADNNRSTHTFNTSEVARIRDMFREWDIDDSDLFGPYELLDFILLDPYRDETGTSSSSGISKGALVGIILAAIAGSVIVSSIVTILILRIRLRDYSALSRRRNVSRISMQIDGVRSFVYEEMALATNNFSESAQVGQGGYGKVYKGHLPDGTVIAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDHLSASSKEPLSFYMRLKISLGSAKGLQYLHTEADPPVFHRDVKASNILLDSKFTAKVADFGLSTLAPVPDVEGNVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEMVTGRPPIFHGENIIRQVNLAYQSGRILSVIDKRMGSYSFEYMEKFLTLALRCCKDAPDDRPKMAEVVRELENIWSMVPESNVKGVEYASSDSGKMFSSQPSSSSTTKTPFISGDMSGSDLSSVYSTNIVYSLSENSIQPESVTTPTFVCKYNSIHQRIVSFQMEDIGFSIIAKIAEYTVDPILHHAQYLCCFNNFAGNFPNAKRDLELTRDSVMERVKEATNRTEKIEPTVEKWLKDVENVLQQLAKSLFLLCCIFPEDHEIELEDLFRFGKGLGLTGTFGTMDKARREMHVAINILMDSCLLLHANKKERVKMHDMVRDVALWIASEKGQAILVSNVMDPRLLVEDETIKDKRAISLWNLKNGQLHNGQLNCPILDILLLHSPNVGFEVSNAYLEGMKMLKILAFLRFGYKWDLYLSRSTNTSKFTLSVQKFIESVKNLRTLCLRGYKLGDISILESLQGLEILDLRGSSFEELPNGIVALKRLKLLDLFNCWIEKNNAYDVIGRCLQLEELHLFLPTVEEDFPYNVSFERLRRYVVLINAKFDFVHRLDFPYMTQIEILDEHRPSRAFCINHFNAPAQSFMSLPIKDLYQRAEDLHLIHLQGGYKNVIPTMDQEGMNQLIFLILEYCPEIECLFDGTIITNTNDPHVDLLQTEAVFSSLVTLRLRSMSGLQEVFRDPSSRCSLKNLEQLNIENCTQLYNISFPRNSKLCNLKFFRIERCQMLTSLLTLSIVQTLEQLEVLQIYKCSKLKHIIGEGEEKRYIDYVSNQSHSSLVLQKLRIIHIEGCDKLEYIFPVCFAQGLARLEMLSIKNSFDLKYVFGTEKEHHLSVYKHHNHEETNIKINLLNLKTLRLDSLSNLVDIWPEYCHPCLPNLEVLRCNKCPRLSNSSVRKVVIDSDLQQDTTAMEKEILWLAATTFNQLCEQRFPPELKAVLNLRLFVLTHLRVEGIFQLQIREPGSNRELVPLTLDLYGLKLINLPQLRFIWKGPTEFLSLQMLRSFHVDGCPKLKNIFSPTIVRSLPKLTQLKIFNCEELEQIFDSGDAQELKSLYTCSQQVCFPKLWNIEVLKCNELKCLFYNFMIGHFPSLKELKIEECIQLEKVFAFEHEADDEVQEVTGEDGEQVLLQNLERLSLKSLPNFKEIHHGFKLEQHVKRTIEDCPKYSPRA* 2049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01130 2048 Gene3D Ribonuclease Inhibitor 1791 2045 IPR032675 -
Rops9g01130 2048 Gene3D Ribonuclease Inhibitor 1643 1780 IPR032675 -
Rops9g01130 2048 SUPERFAMILY RNI-like 1809 2016 - -
Rops9g01130 2048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Rops9g01130 2048 Gene3D - 1120 1205 IPR036388 -
Rops9g01130 2048 Gene3D Ribonuclease Inhibitor 1208 1642 IPR032675 -
Rops9g01130 2048 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 98 259 - -
Rops9g01130 2048 Gene3D Ribonuclease Inhibitor 97 355 IPR032675 -
Rops9g01130 2048 SMART LRR_typ_2 337 362 IPR003591 -
Rops9g01130 2048 SMART LRR_typ_2 384 408 IPR003591 -
Rops9g01130 2048 SMART LRR_typ_2 265 289 IPR003591 -
Rops9g01130 2048 SMART LRR_typ_2 1341 1364 IPR003591 -
Rops9g01130 2048 CDD STKc_IRAK 689 955 - -
Rops9g01130 2048 Gene3D Transferase(Phosphotransferase) domain 1 759 970 - -
Rops9g01130 2048 PANTHER RECEPTOR-LIKE PROTEIN 55 107 956 - -
Rops9g01130 2048 Pfam Protein kinase domain 684 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01130 2048 Gene3D Phosphorylase Kinase; domain 1 654 758 - -
Rops9g01130 2048 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 759 968 - -
Rops9g01130 2048 SUPERFAMILY Protein kinase-like (PK-like) 656 953 IPR011009 -
Rops9g01130 2048 ProSiteProfiles Protein kinase domain profile. 683 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01130 2048 Gene3D Ribonuclease Inhibitor 356 449 IPR032675 -
Rops9g01130 2048 SUPERFAMILY L domain-like 1195 1768 - -
Rops9g01130 2048 SUPERFAMILY L domain-like 111 474 - -
Rops9g01130 2048 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Rops9g01130 2048 Coils Coil 1085 1105 - -
Rops9g01130 2048 Pfam Leucine rich repeat N-terminal domain 100 137 IPR013210 -
Rops9g01130 2048 FunFam Leucine-rich repeat protein kinase family protein 647 758 - -
Rops9g01130 2048 SMART serkin_6 683 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01130 Rops-Chr9 18487000 18507568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01130 85 970 Receptor kinase-like Gene Family AT5G01950 56.841 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops9g01130 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01130 - - gmx:100801035 1379.77