Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01127 ATGCATTCGAAGCTTTTTCCTGTATATGCTGATAATAATAGAAGCTCTCATACCTTCAATACCAGTGAGGTTGTTCGGATCAGAGACATGTTCAGAGAATGGGATATGGATGACAGTGACTTGTTCGGGCCTTATAAACTTCTGGACTTTATTCTCCTAGATCCTTACAGGGATGTATCTAGGATCTCAATGAAAATTGATGGTGTAAGATCTTTCGATTATGAAGGAATGGCCTTGGCTACAAACAATTTCAGTGAATCTGCTCAACTTGGACAGGGGGGTATGGGAAGGTTACATCATCGCAACCTTGTGTCTCTGATTGGATGCTGTGATGAAGAGGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGAACGCTAAGGGATCACCTTTCTGCTTCTTCAAAAGAACCTCTTAGTTTTTACATGAGATTGAAGATTGCTCTAGGTAATATATTATTGGACTCTAAATTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGACTTGCTCCAGTTCCAGATGTTGAAGGCAATGTGCCTGGTCATGTGTCTACAGTGGTAAAGGTGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACCCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAAATGGTGACTGGAAGGCCACCAATCTTTCATGGTGAAAATATTATTAGACAGGTTAATTTAGCATACCAATCTGGTAGAATACTTTCAGTTATTGATAAACATGATAGACCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAATATCTGGTCTTTGGTACTTGAGTCCAATGTCAAGGGATTTGAATATGCTTCAAGTGATTCAGGAAAAATGTTTAGTTCACAACCTTCATCATCTTCTACTATAAAGACTCCTTTTATATCAGGAGATATGTCAGGTAGTGACCTTGTTAGTGGAAGTATACCAACCATTAGGCCAAGATAG 987 0.3931 MHSKLFPVYADNNRSSHTFNTSEVVRIRDMFREWDMDDSDLFGPYKLLDFILLDPYRDVSRISMKIDGVRSFDYEGMALATNNFSESAQLGQGGMGRLHHRNLVSLIGCCDEEGEQMLVYEFMPNGTLRDHLSASSKEPLSFYMRLKIALGNILLDSKFTAKVADFGLSRLAPVPDVEGNVPGHVSTVVKVTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEMVTGRPPIFHGENIIRQVNLAYQSGRILSVIDKHDRPKMAEVVRELENIWSLVLESNVKGFEYASSDSGKMFSSQPSSSSTIKTPFISGDMSGSDLVSGSIPTIRPR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01127 328 ProSiteProfiles Protein kinase domain profile. 1 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01127 328 Pfam Protein kinase domain 151 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01127 328 Pfam Protein tyrosine and serine/threonine kinase 95 149 IPR001245 GO:0004672|GO:0006468
Rops9g01127 328 Gene3D Transferase(Phosphotransferase) domain 1 65 149 - -
Rops9g01127 328 Gene3D Transferase(Phosphotransferase) domain 1 150 300 - -
Rops9g01127 328 SUPERFAMILY Protein kinase-like (PK-like) 69 290 IPR011009 -
Rops9g01127 328 PANTHER OS01G0750732 PROTEIN 66 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01127 Rops-Chr9 18475973 18485708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01127 1 270 Receptor kinase-like Gene Family AT5G01950 42.543 3.14e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops9g01127 Pkinase 7.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01127 - - gmx:100785752 423.32