LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01103	ATGCTTGATTTAAAGCTTATAGTTTTGGATGAAATAGAAGAAAAAACAAGGTCTTTCCGTGAACAGGCAAAGTACAGTACAGGTGATGGAGCTACTGCCCGCAATCTTTATGCTTCCTTCAATGCTGTAATATTCGAATGCCTGTTCATGAGGAAGGTTAACAAGCCTCCACTATCTTTTTCAATGTTGATTAGGTATATGAAGGGAAAGGAAGATGATAAGATTGTTGTGATGATCTTAAGAGAACAAACAAACTACAAGATCAATATCAACAAGGCTTGTCCAAGCTTTCTCCTCACAAACATGCACGTCTGTGATCAATTAAGGAAGGGTGGCAACAAAACTGTAGGCCAGGGTATGACTGCTGCACTTTCTTCTGAGACTCTTTATGGAGCTTCCAGGGTTGAACTTCATTGGTGTGATCGACGAGACAAGATGCCAATATTGGAAGAAGAGAGAATAAGCGAAGCAAGTGTTCTTAGGCAAGTTTACAATCACATTAACGTGTTGACTTCTTTCTTTCTTATATTTAGAGAATGGAGAAGTAAGACGGATGGTTCTCTAGCTGAGCTTGTCCGCAAGCGATATCAGAGTTTTGACACTGAAATTAGGGCTCAAATTGAGATGCTTTGTGAGGAACGAGGTTTCTTACTGGAAATAGCTGACTTAATCAGAGGATTATAG	684	0.3962	MLDLKLIVLDEIEEKTRSFREQAKYSTGDGATARNLYASFNAVIFECLFMRKVNKPPLSFSMLIRYMKGKEDDKIVVMILREQTNYKININKACPSFLLTNMHVCDQLRKGGNKTVGQGMTAALSSETLYGASRVELHWCDRRDKMPILEEERISEASVLRQVYNHINVLTSFFLIFREWRSKTDGSLAELVRKRYQSFDTEIRAQIEMLCEERGFLLEIADLIRGL*	228

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01103	227	Gene3D	-	30	93	-	-
	Rops9g01103	227	Pfam	Ribosomal protein 60S L18 and 50S L18e	37	79	IPR021131	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01103	Rops-Chr9	18119430	18124510	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops9g01103	34	121	Cytoplasmic Ribosomal Protein Gene Family	AT2G47570	38.636	5.47e-10	55.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01103	K02883		-	thj:104802178	57.3806