Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01087 ATGCATGATGGCATTCGTGGGATGAAGCTGGTGTTGTCACGGGAAGGTTCCGGGACTGGCAGTGGTGATAGTAGGGAACATAAGGGATTCACAAAGCTATGTTGGAATGAAGAGAAAGAAGAACTTGTGAGGCTCCATAAAGAGTTTGACCTTGGGATGAGGCTTCCTGCTTGTGATGGCAGAAAAAGTCTGCACACTGCGGGAACACTTCCTTTTTCCTGGAGAAAGTTTAAGATTCAGCTTATAGATGAAAAAGGAGGAGGAAGCATGACCCCAAAACGGGTGGCTGGGCTTTGCATGGAGGAACTCCGTCGTCTGCGACGGCTCCGGCGTTGGTGTTGTCAAACTCCGGGAAGCAGATCGATCAAGCGGGGAGGAAGAATCCTTCTCGATTTTGGTTCTCAGAAAATGGGGACTTTGAGCGGTGATGATGACGGTCTTAACGCTGAGATTGATGAGATAAGAAGCACTGATAATTTTCCTCAGGAGAGCATTGAGAATACTCTAGAACCAAGAGACAACGTGGCTGGTAGATATTCCTACTGGTCAAGTAATGGACAAAGTAATCCCAACGTGCCTGAGACGTTAACATACGAGTTGGTCTCTCAAATTTGTGTTGTTACGGAAATCAATATCCAGCCTTTTCAAGCTGACTTTCAGACGGGGTCACCTATATATTCAGCAAAATCTGTTCGGTTTAGAATGGGTCATATTAAAGTCTCATTTGATTCTTCATCTGATGAAAAGTATGCATGGACGTACACGTCACCAGAGTTCCTAATGACTCAGGAATACCGGCTACAGAATTTCAAGCTTCCAGAACCTGTACTTTGTATTGGTGGTATCTTGCAGATTGAACTTTTGGGAAGGGTACAGAGGCAAGAAATGGATGGCTTATTATACATCTGTGTTTCTTATGTTCAAGCCCTGGGGTCCTCATTGTCACCAGCATTTAGTGTTGATATTCTGGAGCCCTCTGGAATGTTTGTGTTAAAGAGGGACCGGCTGGCCAACTATCCACCCCCCTTTGGGATGTTAATAGGGTCGCTTGTGTTATGA 1059 0.4533 MHDGIRGMKLVLSREGSGTGSGDSREHKGFTKLCWNEEKEELVRLHKEFDLGMRLPACDGRKSLHTAGTLPFSWRKFKIQLIDEKGGGSMTPKRVAGLCMEELRRLRRLRRWCCQTPGSRSIKRGGRILLDFGSQKMGTLSGDDDGLNAEIDEIRSTDNFPQESIENTLEPRDNVAGRYSYWSSNGQSNPNVPETLTYELVSQICVVTEINIQPFQADFQTGSPIYSAKSVRFRMGHIKVSFDSSSDEKYAWTYTSPEFLMTQEYRLQNFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSYVQALGSSLSPAFSVDILEPSGMFVLKRDRLANYPPPFGMLIGSLVL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01087 352 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 156 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01087 Rops-Chr9 17809079 17810590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01087 41 94 Eukaryotic Initiation Factors Gene Family AT5G43810 62.963 2.96e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01087 - - gmx:100527814 318.161