Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01052 ATGGCATGGGGCAGCATTGTCGTGTCTTCTGGCCATCTAATCATAGGCGCTGAACATGTGTTCAACAAGCCATTCACTTTTGGGCTCTCCGATGGATCCAAAATCGTCTATCTCAGGCAGCTTCCAAAGAGGAAAGGGCATGAGAACCTAGTGGTGAGACCCTTCCATCAACCTCATTTTGTTGCTGAGATTCTTGCAGCTCTCTTGCTAAATATAGAAGTACATGGACATTTGCTTCTTCCAGGACTCGTAGGTCCAAAGCAAATCCATGCTGTGGAAACCTTGGCACATGTGGGTCTCATATACTATGTCTTCATCAATGGCTTGGAGATGAACTTGGAAACTATCCAACGAGCAGGAAAGAAGGCAACAACCATTGCTATTGCTGGCACCTTAATTCCAATGGCATTAGGAGCTGGAATATATTTCTTGTTTCAAAATATCAGTGTTATCCATGATCAACTTTCACATTTCAATGGACCTGAAGCTTATATAATGTGGACCTTAGTTGTTAGTGTCACAAGTTTTCCCATCTTGGCTCACATCCTTGTGGACCTAAAGATCCTCTACACTGGGCTTGGTCGAGTAGCATTAACATCATCTACTGTTAATGACTTCTATAATAGGGCTATGTTTGTGCTCTTGGTTCCATTGGCTGTTAATGGTACAAAAGGCTTTTACTCATTAATGGGCACCATAATTTTTATCCTTTTCTGCTTCTTTGTGCTACGCCCTTCTCTCATGAGGCTATTAATCCTAAAGACCAATCAGAATGAAAAGGACAATTACTTGTTATCATATCTGATCATGGGTGTCTTTGCTTGTGCCACTGTTACTGAATTTCTTGGTACAAACTCTGTTGTTGGGGCTTTGGTGTATGGATTGATCCTCCCTCGTGGAAGATTCACTGACATGTTGATAGAGAAGTCAGATGATATTGCATCTGGGTATCTTGCGCCTTTTTTCATTTTCTTCATTGGTCTAAAAGCCAACATACAAGTGATTAAGCCTCAAGATTACCTTTTGATGGTAGTAATCATACTCTTGTTAAGCTGCATGAAGATTGTGAGCACTATAATAGCCACTCGCTTCTATAGAATGCCTTTCCAAGATAGCATGGCTCTTGGAGTGCTTATGAACACCAAAGGCGTCTTACCATTCATAATACTAAACATTGCATGGAATAAAAAGATTTTGAGTCACGAGGCCTTTACAATTTTGGTGTACAGTATTCTTATTATGACTGCGACAGTGTCTCCTATCATCAACGACATTTATAGGCCAAGAAAACAACATGAGCAAAATAAGCTAAGGACTATAGAGAAATTGAAGGCAGATTCAGAGATTAGAGTTATGGTTTGTGTACACAATGCTCGCCATGCCAGTGGAATGATCAACATCCTTGGAGCTTGCAATGGCACAAACATTTCCCCTTTATGTGTTTTTGCTCTTCAACTTGTTGAGCTCAAAGGACGTGCCACTGCCCTTCTAGTTTCCCACATAGACCAATCCACTTCCCAAAAGTATGGAACACATGAAGTTACCAACCTATCAGAATCAAACTCGGAAAGCATCACCGACATTTTTGTAGATTATGCATCTAACCATGAACACACAATTGTGGAGAGCCTTATTGCTATGTCATCCTACACAACCATTCATAAGGACATATACAATTTAGCCTCAGAGAAACAAGCATCATTGGTTCTCCTCCCTTTTCACAAACAATCAAGTGCAGCAGGTACTCTAGAGATAACCAATGCCAGATTCAAAGACATAAACCAAAATTTATTGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCATAGGGACAAAACCTACTTGCGTTTTCTTATGCTCTTCATTGGTGGGCCTGATGACCGTGAAGCCTTAGCTATTGCTTGGAGAATGTCAAAGCATCGAGGGACACAACTCACCATGGTGAGGATTATTTTGTGTGGAAAGGCTGCAGAAGGAGTAGATACATCAGCAAAAATTGAAGTAGAAGGGCTATTATCTGCAGTAATAGATAGTGGAAAGGAAAAAGAGTTGGATGAAGAGTTTATAGGTTCATTTAGACTCAAGGCAGTGAACAATGAGGATTCCATAACTTATGAAGAGATGGAAGTGCACAATGGTGATGATATTACTGAAGTACTTAATCAATTGGACAAAATAGGTTATGATTTATACATTTTAGGACAAGGAAAAGGAAGGAACTCTTTGTTATTGGAAAACTTATTGGAATGGACTGATTGCCCTGAACTCGGAGTTATTGGGGACATGTTGGCATCAAATAGTTTTGGTTCAAGCTCTTCAATACTTGTTGTCCAACAATATGGATTTGGAGGAATGGATTTTGAGACTAATTGTAATCAACATTCAAATAATGATGATCTTGAGTCACTTTTTCCAAAGAAAGAGTGA 2439 0.3989 MAWGSIVVSSGHLIIGAEHVFNKPFTFGLSDGSKIVYLRQLPKRKGHENLVVRPFHQPHFVAEILAALLLNIEVHGHLLLPGLVGPKQIHAVETLAHVGLIYYVFINGLEMNLETIQRAGKKATTIAIAGTLIPMALGAGIYFLFQNISVIHDQLSHFNGPEAYIMWTLVVSVTSFPILAHILVDLKILYTGLGRVALTSSTVNDFYNRAMFVLLVPLAVNGTKGFYSLMGTIIFILFCFFVLRPSLMRLLILKTNQNEKDNYLLSYLIMGVFACATVTEFLGTNSVVGALVYGLILPRGRFTDMLIEKSDDIASGYLAPFFIFFIGLKANIQVIKPQDYLLMVVIILLLSCMKIVSTIIATRFYRMPFQDSMALGVLMNTKGVLPFIILNIAWNKKILSHEAFTILVYSILIMTATVSPIINDIYRPRKQHEQNKLRTIEKLKADSEIRVMVCVHNARHASGMINILGACNGTNISPLCVFALQLVELKGRATALLVSHIDQSTSQKYGTHEVTNLSESNSESITDIFVDYASNHEHTIVESLIAMSSYTTIHKDIYNLASEKQASLVLLPFHKQSSAAGTLEITNARFKDINQNLLQDAPCSVGIFVDRGHRDKTYLRFLMLFIGGPDDREALAIAWRMSKHRGTQLTMVRIILCGKAAEGVDTSAKIEVEGLLSAVIDSGKEKELDEEFIGSFRLKAVNNEDSITYEEMEVHNGDDITEVLNQLDKIGYDLYILGQGKGRNSLLLENLLEWTDCPELGVIGDMLASNSFGSSSSILVVQQYGFGGMDFETNCNQHSNNDDLESLFPKKE* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01052 812 PANTHER CATION/H + ANTIPORTER 50 784 - -
Rops9g01052 812 Gene3D - 49 436 IPR038770 -
Rops9g01052 812 Pfam Sodium/hydrogen exchanger family 52 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01052 Rops-Chr9 17237321 17243636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01052 51 784 Antiporter Super Family AT2G13620 37.981 3.93e-176 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01052 - - mtr:11442852 917.916