Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01028 ATGAGGGCAAAGGTTGCAGATTTTGGTCTAGTGCGTCTTGCTCCAGAAGGAAAAGCCTCTATTGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGAGTAATATTGATGGAGTTGATAACTGGAAGAAAAGCACTTGATGAGACCCAACCTGAGGATAGCATGCACCTTGTGACATGGTTCCGCAGAATGTACATAAACAAGGACTCATTTCGCAAGGCCATTGACCTCACAATTGAGATCAATGAGGAAACACTTGCTAGTATTCACACCGTAGCAGAGTTAGCTAGTCATTGCTGTGCAAGGGAACCATATCAAAGGCCTGACATGGGTCATGTTGTTAATGTGCTCTCTTCTCTTATAGAACTATGGAAACCATCTGATCAGAATTCTGATGATATATATGGTATTGACCTTGACATGTCTTTACCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTGGAAGTCAAATGGAGTCATCTTCTTCACTTCCTCCAAGCTTGGACAACACGCAAACAAGTATACCTACTCGTCCCTATGGATTTGCCGATTCTTTCACTTCAGTAGATGGTAGGTGA 639 0.4225 MRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMYINKDSFRKAIDLTIEINEETLASIHTVAELASHCCAREPYQRPDMGHVVNVLSSLIELWKPSDQNSDDIYGIDLDMSLPQALKKWQAYEGGSQMESSSSLPPSLDNTQTSIPTRPYGFADSFTSVDGR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01028 212 MobiDBLite consensus disorder prediction 176 201 - -
Rops9g01028 212 MobiDBLite consensus disorder prediction 176 212 - -
Rops9g01028 212 SUPERFAMILY Protein kinase-like (PK-like) 2 145 IPR011009 -
Rops9g01028 212 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Rops9g01028 212 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01028 212 PANTHER OSJNBA0070M12.3 PROTEIN 1 212 - -
Rops9g01028 212 Pfam Protein kinase domain 3 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01028 Rops-Chr9 16893650 16897481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01028 1 136 Receptor kinase-like Gene Family AT4G02010 47.445 4.86e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops9g01028 Pkinase 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01028 K00924 - lja:Lj0g3v0022049.1 383.259