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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops9g00970
ATGGAGAGTAATCCTCCTCCGTCGTTGGAGGCTCATGATGCAGTTGCAACGCCGGTGGCCGTACGGAGAGCCTTGGAGCTGCTCCAAATGGACGACCTTGATTTGAGAGTCCAAGCTGCTAGGGAAATCCGCCGTCTTACCAAGTCCTCCCACCGTTGCCGCCGTCAGCTCCGTCAAGCTGTGGCCCCACTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCACTCTTCTCGCCTTGCTTAACCTCGCTGTCCAAGACGAAAAGAATAAAATTAACATTGTGGAAGCTGGTGCATTAGAACCGATAGTTAGCTTCCTCAAGTCACAAAATCCAAATCTGCAGGAGTATGCAACTGCATCTTTGCTCACTCTATCTGCCTCTACAACCAACAAACCAATCATTAGTGCTTATGGCACCATTCCTCTTCTTGTGAAAATTCTTAAAGATGGAAGCCCACAAGCTAAAGCTGATGCAGTAATGGCTCTGTCCAATTTATCAACACACCCTGATAACCTCAACATCATTCTTGAAACAAATCCAATCCCTTCTATAGTCAACCTTCTTAAGACCTGTAAAGAATCCTCAAAAGTAGCTGAAAAATGCTGTGCTTTGATAGAGTCCTTGGTGGGTTATGAGGAGGGCAGAACCGCATTAACATCTGAAGAAGGTGGGGTTCTTGCAGTTGTTGAAGTTCTTGAAAATGGCACTCCTCAAAGTAGGGAAAATGCAGTTGGAGCACTTTTGACAATGTGCCAAAGTGATAGATGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTTATTCCAGGACTTCTTGAGCTTACTGTTCAAGGAACACAAAAGTCTCAGCCAAAAGCACGTACCCTTTTGCAATTACTGAGAGAGTCTCCTTATTCAAGACCTGAAATTGAACCTGACACTCTTGAGAACATAGTGTGTGACATCATATGTCAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTTTGAGACATTTACAGAAAAGGGCTCTTGTATGCACGACAACAAGTGATCTACCTATTACTAGTTGTGCTTCTGAGGTTTCTTCAAAATGA
1131
0.4483
MESNPPPSLEAHDAVATPVAVRRALELLQMDDLDLRVQAAREIRRLTKSSHRCRRQLRQAVAPLVSMLRVDSPESHEPTLLALLNLAVQDEKNKINIVEAGALEPIVSFLKSQNPNLQEYATASLLTLSASTTNKPIISAYGTIPLLVKILKDGSPQAKADAVMALSNLSTHPDNLNIILETNPIPSIVNLLKTCKESSKVAEKCCALIESLVGYEEGRTALTSEEGGVLAVVEVLENGTPQSRENAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTQKSQPKARTLLQLLRESPYSRPEIEPDTLENIVCDIICQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQKRALVCTTTSDLPITSCASEVSSK*
377
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops9g00970
376
ProSiteProfiles
Armadillo/plakoglobin ARM repeat profile.
101
138
IPR000225
GO:0005515
Rops9g00970
376
ProSiteProfiles
Armadillo/plakoglobin ARM repeat profile.
183
227
IPR000225
GO:0005515
Rops9g00970
376
Gene3D
-
3
356
IPR011989
-
Rops9g00970
376
Pfam
Armadillo/beta-catenin-like repeat
91
129
IPR000225
GO:0005515
Rops9g00970
376
PANTHER
U BOX DOMAIN-CONTAINING
20
300
-
-
Rops9g00970
376
SMART
arm_5
131
171
IPR000225
GO:0005515
Rops9g00970
376
SMART
arm_5
215
256
IPR000225
GO:0005515
Rops9g00970
376
SMART
arm_5
172
214
IPR000225
GO:0005515
Rops9g00970
376
SMART
arm_5
49
88
IPR000225
GO:0005515
Rops9g00970
376
SMART
arm_5
90
130
IPR000225
GO:0005515
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops9g00970
Rops-Chr9
15860392
15865554
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops9g00970
21
298
U-box Gene Family
AT2G23140
33.214
1.12e-37
141
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops9g00970
-
-
gmx:100793971
575.474
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Rops9g00970
9
15860392
15865554
Rops9g00970
9
15860392
15865554
ECH
Rops11g03518
11
67235788
67239112
Rops9g00970
9
15860392
15865554
PCT
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