Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00944 ATGGCTTCAAACTCCCTCAACAAAGAAATTTCTTCCCCTTGGACATCCATGCAGAACAAGCAATTTGAAAGAGCACTTGCCTTGTATGACAAAGACACCCCAGATAGATGGCAAAATATAGCAAAAGTAGTGGGTAATAAATCAGCTGAGGAAGTGAAGAGACACTATGAAATCCTTTTAGAGGATGTTCATCATATAGAGTCTGGACATATTCCAATTCCCAGCTACAAAGTCCACAGCAAGCAGCAATGA 252 0.4048 MASNSLNKEISSPWTSMQNKQFERALALYDKDTPDRWQNIAKVVGNKSAEEVKRHYEILLEDVHHIESGHIPIPSYKVHSKQQ* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00944 83 Gene3D - 7 73 - -
Rops9g00944 83 ProSiteProfiles Myb-like domain profile. 12 60 IPR001005 -
Rops9g00944 83 CDD SANT 13 60 IPR001005 -
Rops9g00944 83 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Rops9g00944 83 SUPERFAMILY Homeodomain-like 12 68 IPR009057 -
Rops9g00944 83 ProSiteProfiles SANT domain profile. 9 64 IPR017884 -
Rops9g00944 83 SMART sant 10 62 IPR001005 -
Rops9g00944 83 FunFam Transcription factor SRM1 6 73 - -
Rops9g00944 83 Pfam Myb-like DNA-binding domain 12 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00944 Rops-Chr9 15332617 15332868 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops9g00944 Myb_DNA-binding 9.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00944 - - gmx:100808556 133.265