Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00935 ATGGTAGCAAAGACAAGCATCTCAACCTTTCATCCTAAAATGAAAAAAGTTTTGTTAATACCTTCAAAAATATTAAAAATAGATGCTCTTATAGCAGTTCATATTCTGGTCATCTATGAATCCCTTGATAATCCAACAGTAGGAAAGAAGATTGGATCTACTGCTTCTGTAGAAGTTGCTAATGATTATCATCATGTTCTTGATGCTGTTGGGAACATATTTTATCAGGGTATAACAGATATTCGAGTAAATAATAAATTGTCAGAGATAGTTAGCCATACAGTAAAGGTCCTACCAGAGCTTTGGAAACAAGCCGGTTGCTATGATGATGCAATCTCTGCTTATACGCGTGCCCTTCTTAGTCAATGGAACCTTAACAACAAATGTTGTGCAAGAATTCAGAAATTTTTATTTTTATTTTTATTTTGCTGTACAATGGGGAGAGGCAAGTCCACCTAG 459 0.3486 MVAKTSISTFHPKMKKVLLIPSKILKIDALIAVHILVIYESLDNPTVGKKIGSTASVEVANDYHHVLDAVGNIFYQGITDIRVNNKLSEIVSHTVKVLPELWKQAGCYDDAISAYTRALLSQWNLNNKCCARIQKFLFLFLFCCTMGRGKST* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00935 152 PANTHER PROTEIN NPG1 58 144 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00935 Rops-Chr9 15169219 15169677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00935 58 142 Calmodulin-binding Proteins AT2G43040 61.176 5.62e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00935 K21843 - gmx:100814609 127.487