Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00931 ATGGCTGGGATTTGTTGTGGTGTTGTTGGAGAGGGAGAGACTCCTACTCCTATTGACCCAACCTCACGGCCTTCCGCTCGCCGGAGTTTGGACCTATTCCCCTTGAAATACATAGCGGACATGGCGATTCCGCCGCCGGAGAGTAGTCGGAAGAGGCAGAAGCTGGATCTGTGCATATCTCCGGCGCCGAAGAAGCCACGGGAGTGTGAGAACGCGGTTGAAAGTTGCGAACCGAGTATTACAACCAAGGAGGATAAAGAAAAGGAAGTTAATTGTTCGGGGATTTCTACGAGGTTGGAAAACGAGGTTGTTGAAGAGTTTCCAAAGTATGGGGTAACGTCGGTTTGTGGAAGGAGGAGGGACATGGAAGATGCAGTTTCGGTGCATCCATCGTTCTACCAAGAAAAGGGTCAGAAAGGGTTTCATTTCTTCGGTGTTTACGATGGTCACGGTTGCTCACATGTGGCTACCAATTGCAAAGAAAGGCTTCATGAAATAGTGAAAGAAGAGATAGACAAATCCAAAGAAAATTTAGAATGGAAATCAACGATGGAACATAGTTTCGCTCTCATGGACGAAGAGGTTTTGAGTTGGAGCCAAAGTAACCAAACCTCAACTTGCAGGTGCGAGCTTCAGACTCCTCACTGCGACGCCGTTGGCTCCACCGCCGTTGTCGCCGTCGTCACACCGGAAAAGATAATCGTCTCTAACTGCGGTGATTCACGCGCCATCCTTTGCCGGAACGGCGTCGCCATCCCACTATCCTCCGATCACAAGCCGGATCGACCCGACGAATTGATTCGGATCCAAGAAGCGGGAGGGCGCGTGATCTATTGGGATGGTCCAAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATTTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAACGGAGTGACGAGGATGAATGTTTGATACTCGCAAGTGATGGCCTTTGGGACACGGTGCAAAACGACACCGCATGCAGGGTGGTGAGGATGTGTCTTAATTCGGAGAAACCGCCTTCTCCGCCAGGGTCTCCGTCGAGTGACATGGCGGCCGACGGCTCCGACAAGACGTGTTTTCATGCCTCCATTCTGCTGACGAAGTTGGCTTTGGCGAGGCACAGTTCGGACAATGTGAGCGTTGTGGTGGTCGATTTGAAAAGAGATAGATCAACATCAACAACTACAATATGA 1227 0.5077 MAGICCGVVGEGETPTPIDPTSRPSARRSLDLFPLKYIADMAIPPPESSRKRQKLDLCISPAPKKPRECENAVESCEPSITTKEDKEKEVNCSGISTRLENEVVEEFPKYGVTSVCGRRRDMEDAVSVHPSFYQEKGQKGFHFFGVYDGHGCSHVATNCKERLHEIVKEEIDKSKENLEWKSTMEHSFALMDEEVLSWSQSNQTSTCRCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAILCRNGVAIPLSSDHKPDRPDELIRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDEDECLILASDGLWDTVQNDTACRVVRMCLNSEKPPSPPGSPSSDMAADGSDKTCFHASILLTKLALARHSSDNVSVVVVDLKRDRSTSTTTI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00931 408 ProSiteProfiles PPM-type phosphatase domain profile. 109 397 IPR001932 -
Rops9g00931 408 PANTHER PROTEIN PHOSPHATASE 82 397 IPR015655 GO:0004722|GO:0006470
Rops9g00931 408 SUPERFAMILY PP2C-like 108 398 IPR036457 -
Rops9g00931 408 CDD PP2Cc 109 346 IPR001932 -
Rops9g00931 408 Gene3D - 103 406 IPR036457 -
Rops9g00931 408 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Rops9g00931 408 FunFam Protein phosphatase 2C 37 104 404 - -
Rops9g00931 408 SMART PP2C_SIG_2 124 397 IPR001932 -
Rops9g00931 408 SMART PP2C_4 97 395 IPR001932 -
Rops9g00931 408 Pfam Protein phosphatase 2C 109 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00931 Rops-Chr9 15107170 15109305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00931 1 345 PP2C-type Phosphatase Gene Family AT3G11410 61.798 1.41e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00931 K14497 - gmx:100796161 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03562 11 68062983 68064940 Rops9g00931 9 15107170 15109305 ECH
Rops9g00931 9 15107170 15109305 Rops9g00931 9 15107170 15109305 ECH
Rops11g03562 11 68062983 68064940 Rops9g00931 9 15107170 15109305 PCT