Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00908 ATGGTCTCTTTAAGGCCATGCCTTCTTTTCATCCTCACCTGCCTTCTGATAACTAGTCATGCATACTCCAAGAATGATCGGAAGACCTACATTGTCTACATGGGTGATCATCCTGACGGCGTGGACCCCACATCTTTACCTTCTCTTCATATGTCCATGGCTCAAAAAGTCCTTGGCAGCGATTTTGAACCAGGAGCTATACTTCACAGCTACAAGGATAGCTTTAATGGATTCGCCATGAAGTTAACAGAAGAGGAGGCAGAAAAAATGTCAGAAATGGACGATGTTGTCTCTGTTTTCCCAAGCAAAAAGTATAATCTTCACACAACAAGATCGTGGGATTTCATAGGATTTCCCCAGCAAGTCAAAAGAACAAATTTGGAGAGTGACATAATTGTTGGAGTAATAGACACAGGAATTTGGCCGGAGTCCAAGAGTTTCAGTGACGAAGGATATGGTCCTCCACCAAGCAAATGGAAAGGATCATGCCATAACTTTTCCTGCAACAACAAAATAATTGGTGCAAAATACTTTAATATCGAAGGTGGCTATGGGGAAACAGATATCAAATCTCCTAGAGACACAAATGGCCACGGTTCACACTGTGCATCCACAGTTGCTGGAAACTTGGTTAACTCAGCAAGCCTATTAGGCTATGCATCAGGGACAGCCCGAGGCGGAGTTCCATCAGCGCGCATTGCAGTGTACAAAGCATGTTGGGAGGATGGTTGTGGTGAGGTTGACATCCTTGCAGCATTTGATGCTGCAATTGCTGATGGAGTTGACGTGATTTCTGCTTCATTAGGAGAGAATGAAATATCATCCCCACCCTATTTTCATAGTACAGTTAATGTAGGAAGTTTTCATGCAATGAAAAGAGGCATATTTACTTCAAATTCTGCCAATAATTACGGCCCGAATTTATACACTATGACAAATTTTCCACCGTGGTTACTTTCTGTGGCTGCTAGCACTTTTGGCAGAGAGTTCGTTACTAAGGTGCAGTTGGGCAATGGCGCTGTTTATGAGGGGACTTCAATTAACACATTTGATCTCAAAAACAAAATGTTTCCATTGATTTACGCCGGAGATATACCCAACACTGCTGGTGGATTTAACAGTTCCATATCCAGGTATTGCTACGAGAACTCTGTGGACAAACATTCAATGAAGGGAAAGATTGTTCTATGTGATGGCATTCAGGATCCTACAGACTTAGGGTTATTTTCTGGGGCGGCTGGTGTTATATTTGGAGCTATTTCCCCAAAAGATTCGGCATCAACATTTGCCCCGCCTGGGGCGTTCCTTAGCCAAGAGAACTTTAGACGAATACGATCTTACGTTACTTCAACAAGAAATCCAACGGCTACAATATTTAAGAGTGATGAAGTCAGAGATTCGTTAAGCCCATACATAGCATCCTTCTCATCAAGAGGTCCAAACCCAATTACGCCAAACATTCTCAAGCCTGATATCGCAGCCCCAGGAGTTAATATTCTAGCTGCATGGTCTCTAGTCGACTCAATTTCAGAAGTTCAAGGTGACAAAAGACTAGCACAATATAATATAATATCTGGCACTTCAATGGCTTGTCCTCATGCTGCTGCAATAGCTGTATATGTCAAATCATTTCACCCCAGTTGGTCTCCTGCTATGATCAAGTCTGCATTGATGACCACAGCTACTCCAATGAGTCCTGCTCTTAGTCCTGAAGCTGAATTCGCATATGGCGCGGGGCTAATTAATCCTCTTAAGGCAGTAAATCCTGGTTTTGTATATGATATTAGCGAAGCAGATTATGTCCAGTTCCTGTGCGGAGAGGGGTATGATGATAAAAGGCTCCGAGTTCTTACTAAAGATAAGAGTAGTTGTAAAGGAAAAGCTAACAAGAAAGTTGTATTCAACTTGAACCTCCCATCATTTGCTCTTCATGAAAATGCCACACCGTTCAGTCATGTTTTCTATAGAACAGTTACAAACATGGGATCAACAACATCTACTTATAAAGTCAAAGTAATATCTCCACCTTTGTTAGAAATTCAAGTGAAACCAAATATTTTGTCCTTCACATCTATAGGGCAAAAAAAGTCATTCTCGGTCATAATTGAAGGGACACTCAATGTGCCAATTATCTCTGCTTCTTTGATTTGGGATGATGGAAATTTTCAAGTTAGAAGCCCAATTGTAGTGTATGGGAACCTCCACTAA 2208 0.4167 MVSLRPCLLFILTCLLITSHAYSKNDRKTYIVYMGDHPDGVDPTSLPSLHMSMAQKVLGSDFEPGAILHSYKDSFNGFAMKLTEEEAEKMSEMDDVVSVFPSKKYNLHTTRSWDFIGFPQQVKRTNLESDIIVGVIDTGIWPESKSFSDEGYGPPPSKWKGSCHNFSCNNKIIGAKYFNIEGGYGETDIKSPRDTNGHGSHCASTVAGNLVNSASLLGYASGTARGGVPSARIAVYKACWEDGCGEVDILAAFDAAIADGVDVISASLGENEISSPPYFHSTVNVGSFHAMKRGIFTSNSANNYGPNLYTMTNFPPWLLSVAASTFGREFVTKVQLGNGAVYEGTSINTFDLKNKMFPLIYAGDIPNTAGGFNSSISRYCYENSVDKHSMKGKIVLCDGIQDPTDLGLFSGAAGVIFGAISPKDSASTFAPPGAFLSQENFRRIRSYVTSTRNPTATIFKSDEVRDSLSPYIASFSSRGPNPITPNILKPDIAAPGVNILAAWSLVDSISEVQGDKRLAQYNIISGTSMACPHAAAIAVYVKSFHPSWSPAMIKSALMTTATPMSPALSPEAEFAYGAGLINPLKAVNPGFVYDISEADYVQFLCGEGYDDKRLRVLTKDKSSCKGKANKKVVFNLNLPSFALHENATPFSHVFYRTVTNMGSTTSTYKVKVISPPLLEIQVKPNILSFTSIGQKKSFSVIIEGTLNVPIISASLIWDDGNFQVRSPIVVYGNLH* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00908 735 ProSitePatterns Serine proteases, subtilase family, histidine active site. 198 208 IPR022398 -
Rops9g00908 735 CDD Peptidases_S8_3 105 562 IPR034197 -
Rops9g00908 735 Pfam Subtilase family 129 579 IPR000209 GO:0006508|GO:0008236
Rops9g00908 735 CDD PA_subtilisin_like 334 458 - -
Rops9g00908 735 Pfam Fibronectin type-III domain 635 730 IPR041469 -
Rops9g00908 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 730 IPR045051 -
Rops9g00908 735 Gene3D - 327 465 - -
Rops9g00908 735 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Rops9g00908 735 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Rops9g00908 735 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Rops9g00908 735 Gene3D - 604 733 - -
Rops9g00908 735 ProSiteProfiles Serine proteases, subtilase domain profile. 112 587 - -
Rops9g00908 735 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Rops9g00908 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Rops9g00908 735 Gene3D Peptidase S8/S53 domain 130 600 IPR036852 GO:0004252|GO:0006508
Rops9g00908 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Rops9g00908 735 FunFam Subtilisin-like protease SBT5.3 18 108 - -
Rops9g00908 735 FunFam Subtilisin-like protease SBT1.5 130 339 - -
Rops9g00908 735 SUPERFAMILY Subtilisin-like 107 590 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00908 Rops-Chr9 14828385 14834384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00908 7 731 Subtilisin-like Serine Gene Family AT3G46850 46.980 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00908 - - gmx:100815516 1084.32