LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g00908	ATGGTCTCTTTAAGGCCATGCCTTCTTTTCATCCTCACCTGCCTTCTGATAACTAGTCATGCATACTCCAAGAATGATCGGAAGACCTACATTGTCTACATGGGTGATCATCCTGACGGCGTGGACCCCACATCTTTACCTTCTCTTCATATGTCCATGGCTCAAAAAGTCCTTGGCAGCGATTTTGAACCAGGAGCTATACTTCACAGCTACAAGGATAGCTTTAATGGATTCGCCATGAAGTTAACAGAAGAGGAGGCAGAAAAAATGTCAGAAATGGACGATGTTGTCTCTGTTTTCCCAAGCAAAAAGTATAATCTTCACACAACAAGATCGTGGGATTTCATAGGATTTCCCCAGCAAGTCAAAAGAACAAATTTGGAGAGTGACATAATTGTTGGAGTAATAGACACAGGAATTTGGCCGGAGTCCAAGAGTTTCAGTGACGAAGGATATGGTCCTCCACCAAGCAAATGGAAAGGATCATGCCATAACTTTTCCTGCAACAACAAAATAATTGGTGCAAAATACTTTAATATCGAAGGTGGCTATGGGGAAACAGATATCAAATCTCCTAGAGACACAAATGGCCACGGTTCACACTGTGCATCCACAGTTGCTGGAAACTTGGTTAACTCAGCAAGCCTATTAGGCTATGCATCAGGGACAGCCCGAGGCGGAGTTCCATCAGCGCGCATTGCAGTGTACAAAGCATGTTGGGAGGATGGTTGTGGTGAGGTTGACATCCTTGCAGCATTTGATGCTGCAATTGCTGATGGAGTTGACGTGATTTCTGCTTCATTAGGAGAGAATGAAATATCATCCCCACCCTATTTTCATAGTACAGTTAATGTAGGAAGTTTTCATGCAATGAAAAGAGGCATATTTACTTCAAATTCTGCCAATAATTACGGCCCGAATTTATACACTATGACAAATTTTCCACCGTGGTTACTTTCTGTGGCTGCTAGCACTTTTGGCAGAGAGTTCGTTACTAAGGTGCAGTTGGGCAATGGCGCTGTTTATGAGGGGACTTCAATTAACACATTTGATCTCAAAAACAAAATGTTTCCATTGATTTACGCCGGAGATATACCCAACACTGCTGGTGGATTTAACAGTTCCATATCCAGGTATTGCTACGAGAACTCTGTGGACAAACATTCAATGAAGGGAAAGATTGTTCTATGTGATGGCATTCAGGATCCTACAGACTTAGGGTTATTTTCTGGGGCGGCTGGTGTTATATTTGGAGCTATTTCCCCAAAAGATTCGGCATCAACATTTGCCCCGCCTGGGGCGTTCCTTAGCCAAGAGAACTTTAGACGAATACGATCTTACGTTACTTCAACAAGAAATCCAACGGCTACAATATTTAAGAGTGATGAAGTCAGAGATTCGTTAAGCCCATACATAGCATCCTTCTCATCAAGAGGTCCAAACCCAATTACGCCAAACATTCTCAAGCCTGATATCGCAGCCCCAGGAGTTAATATTCTAGCTGCATGGTCTCTAGTCGACTCAATTTCAGAAGTTCAAGGTGACAAAAGACTAGCACAATATAATATAATATCTGGCACTTCAATGGCTTGTCCTCATGCTGCTGCAATAGCTGTATATGTCAAATCATTTCACCCCAGTTGGTCTCCTGCTATGATCAAGTCTGCATTGATGACCACAGCTACTCCAATGAGTCCTGCTCTTAGTCCTGAAGCTGAATTCGCATATGGCGCGGGGCTAATTAATCCTCTTAAGGCAGTAAATCCTGGTTTTGTATATGATATTAGCGAAGCAGATTATGTCCAGTTCCTGTGCGGAGAGGGGTATGATGATAAAAGGCTCCGAGTTCTTACTAAAGATAAGAGTAGTTGTAAAGGAAAAGCTAACAAGAAAGTTGTATTCAACTTGAACCTCCCATCATTTGCTCTTCATGAAAATGCCACACCGTTCAGTCATGTTTTCTATAGAACAGTTACAAACATGGGATCAACAACATCTACTTATAAAGTCAAAGTAATATCTCCACCTTTGTTAGAAATTCAAGTGAAACCAAATATTTTGTCCTTCACATCTATAGGGCAAAAAAAGTCATTCTCGGTCATAATTGAAGGGACACTCAATGTGCCAATTATCTCTGCTTCTTTGATTTGGGATGATGGAAATTTTCAAGTTAGAAGCCCAATTGTAGTGTATGGGAACCTCCACTAA	2208	0.4167	MVSLRPCLLFILTCLLITSHAYSKNDRKTYIVYMGDHPDGVDPTSLPSLHMSMAQKVLGSDFEPGAILHSYKDSFNGFAMKLTEEEAEKMSEMDDVVSVFPSKKYNLHTTRSWDFIGFPQQVKRTNLESDIIVGVIDTGIWPESKSFSDEGYGPPPSKWKGSCHNFSCNNKIIGAKYFNIEGGYGETDIKSPRDTNGHGSHCASTVAGNLVNSASLLGYASGTARGGVPSARIAVYKACWEDGCGEVDILAAFDAAIADGVDVISASLGENEISSPPYFHSTVNVGSFHAMKRGIFTSNSANNYGPNLYTMTNFPPWLLSVAASTFGREFVTKVQLGNGAVYEGTSINTFDLKNKMFPLIYAGDIPNTAGGFNSSISRYCYENSVDKHSMKGKIVLCDGIQDPTDLGLFSGAAGVIFGAISPKDSASTFAPPGAFLSQENFRRIRSYVTSTRNPTATIFKSDEVRDSLSPYIASFSSRGPNPITPNILKPDIAAPGVNILAAWSLVDSISEVQGDKRLAQYNIISGTSMACPHAAAIAVYVKSFHPSWSPAMIKSALMTTATPMSPALSPEAEFAYGAGLINPLKAVNPGFVYDISEADYVQFLCGEGYDDKRLRVLTKDKSSCKGKANKKVVFNLNLPSFALHENATPFSHVFYRTVTNMGSTTSTYKVKVISPPLLEIQVKPNILSFTSIGQKKSFSVIIEGTLNVPIISASLIWDDGNFQVRSPIVVYGNLH*	736

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g00908	735	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	198	208	IPR022398	-
	Rops9g00908	735	CDD	Peptidases_S8_3	105	562	IPR034197	-
	Rops9g00908	735	Pfam	Subtilase family	129	579	IPR000209	GO:0006508\|GO:0008236
	Rops9g00908	735	CDD	PA_subtilisin_like	334	458	-	-
	Rops9g00908	735	Pfam	Fibronectin type-III domain	635	730	IPR041469	-
	Rops9g00908	735	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	30	730	IPR045051	-
	Rops9g00908	735	Gene3D	-	327	465	-	-
	Rops9g00908	735	PRINTS	Subtilisin serine protease family (S8) signature	128	147	IPR015500	-
	Rops9g00908	735	PRINTS	Subtilisin serine protease family (S8) signature	194	207	IPR015500	-
	Rops9g00908	735	PRINTS	Subtilisin serine protease family (S8) signature	525	541	IPR015500	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g00908	Rops-Chr9	14828385	14834384	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops9g00908	7	731	Subtilisin-like Serine Gene Family	AT3G46850	46.980	0.0	642

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g00908	-		-	gmx:100815516	1084.32

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