Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00894 ATGGACGATGTTGTCTCTGTTTTCCCAAGCACAAAGTATAATCTTCACACAACAAGATCGTGGGACTTCATAGGATTTCCCCAGCAAGTCAAAAGAACAAGTTTGGAGAGTGACATAATTGTTGGAGTAATAGACTCAGGAATTTGGCCAGAGTCCAAGAGCTTCAGTGACAAAGGATTTGGTCCTCCTCCAAGAAAATGGAAGGGAACATGTCATAACTTTACTTGCAACAACAAAATAATTGGCGCAAGATACTTTAATATCGAAGGTTCCTTTGTGAAAACAGACATCAAATCTCCTAGAGATTCAAATGGCCACGGGACACACTGTGCATCCACAGTTGCTGGAAACTTGGTTAACTCAGCAAGCCTATTCGGCTATGCCTCAGGGACAGCCCGTGGTGGAGTTCCATCAGCACGCATTGCGGTGTACAAAGTATGTTGGGCAGGTTGTGGTGAGGCTGATATCCTTGCAGCATTTGATGCTGCAATTGCTGATGGAGTTGACGTGCTTTCTCTTTCACTCGGACCGACAACTATAGTGCACCTTCCCTATTTTCAAAGTTCAATTAACATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTTTCCTCAAATTCTGCTAATAATTTAGGCCCGGAGTTGCTCTCCATGACAAATTTTCCACCGTGGATACTTTCTGTGGCTGCTAGCACTTTTGGCAGAAAGTTCGTTACCAAGGTGAAGTTGGGCAATGGCGCTGTTTATGAGGGGTCTACAATTAACACATTTGATCTAAAAAGCAAAATGTTTCCATTGATTTATGCTGGAGATATACCCAACACTGCTGGTGGTTTTAACAGTTCCGTATCCAGGTTTTGCTCCAAGAATTCTGTGGACAAGCATTCAGTGAAAGGAAAGATAGTTCTATGTGAGAGGATTCAGGATCCTCGGGAGATTGGGTTTTTCTTTGGGGCAGCTGGTGTTATATTTGGACAAGTTTCCCCAAAAGATCTGTCATCAACATTTGCGCTGCCTGCAACGTTTATTAGTCTAGGGAACCTAAGACATATACAATCTTACATAACCTCAACAAGAAATCCAACGGCCACAATATTTAAGAGTGATGAAGTCAAAGATTCATTAAGCCCATACATTGTTTCCTTCTCATCAAGAGGTCCAAACCCAATTACGCCAAACATTCTCAAGCCTGATATCGCTGCCCCAGGAGTTAATGTTCTAGCTGCATGGTCTCAAGTCGACCCAATTTCAGAATTTCAAGGTGACAAAAGACTAGTACCATATCAAGTAATCTCTGGCACTTCAATGGCTTGTCCTCATGCTGCCGCAGCGGCTGTATATGTCAAATCATTTCGCCCCAATTGGTCTCCTGCTATGATAAAGTCTGCAATGATGACCACGGCTACTCAAATGAGTTCTGCTCTTAATCCTGAAGCTGAATTTGCGTATGGCGCGGGGCTAATTAATCCTCTTAAGGCTGTAAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTATGTCCAATTCCTGTGCGGAGAGGGGTATGATGATAAAATACTCCGAATTCTTACTCAAGATAAGAGTAGTTGCAAAGGAAAAGCTGACAAGAGAGTTGTATACAACTTGAACCTCCCATCATTTTCTCTTTTTGAAAATGCCAAATCTTTCAGTCATGTTTTCCGTAGAACAGTTACAAATGTGGGATCGGCAACATCCACTTATAATGCCACAATAATATCTCCATCTTTGTTACAAATTCAAGTGAAACCAAATATTTTGTCCTTCACATCTATAGGGCAGAAAAAGTCATTCTCGATCACTATTGAAGGGAAACTCAGCGTGGAACTAATCTCTGCTTCTTTGATTTGGGATGATGGAAATTTTCAAACCTACATTGTCTACATGGGTGATCATCCTAATGGCGTGGACCCCACATCTTTACCTTCTGTTCATATGGCCATGGCTCAAAAAGTCCTTGACAGCGATTTTGAACCAGGAGCTATACTTCATAGCTACAAGCAAAGCTTTAATGGATTCGTCATGAAGTTAACAGAAGAGGAGGCACAAAGAATGGCAGATATGGACGATGTTGTCTCTGTCTTCCCAAGCACAAAGTATCATTTTCACACAACAAGATCGTGGGACTTCATAGGATTTCCTCAGCAAGTCAAAAGAACAAGTTTGGAGAGTGACATAATTGTTGGAGTAATAGACTCAGGAATTTGGCCAGAGTCCAAGAGCTTCAGTGATGAAGGATTTGGTCCTCCACCAAGAAAATGGAAGGGAACATGCCATAACTTTACCTGCAACAACAAGATAATTGGTGCAAAATACTTTAATATCGAAGGTTCCTATGAGAAAACAGACTTCAAATCTCCTAGAGACTCACATGGCCACGGGACACACTGTGCATCCACAGCTGCTGGAAACTTGGTTAACTCTGTAAGCCTAATGGGCTATGCCTCAGGGACAGCCCGGGGAGGAGTTCCATCAGCACGCATTGCAATGTACAAAGTATGTTGGGCAGGTTGTGGTGAGGCTGATGTTCTTGCTGCATTTGATGCAGCAATTGCTGAAGGAGTTGACGTGATTTCTATTTCAATAGGACCGTCTGAAATAGTACACCTTCCATATTTTCAAAGTTCAATTAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGACTTCAAATTCTGCCAATAATTTGGGCCCGCAATTATACACTATGACAAATTTTCCACCGTGGTTACTTTCTGTGGCTGCTAGCACTTTTGGCAGAAAGTTCGTTACCAAGGTGAAGTTGGGCAATGGTGCTGTTTATGAGGGGTCTTCAATTAACACATTGGATCTCAAAAAGAAAATGTTTCCATTAATTTACGCTGGAGATATACCCAACACTGCCGGTGGATTTAACAGTTCCATATCCAGGTTTTGCTTCAAGGACTCTGTGGACGGGCATTCAGTGAAGGGAAAGATCGTTCTATGTGAGGGCCTTCAGGATCCTCGGGACGTGGGGTTTTTTTCTGGGGCGGCTGGTATTATATTTGGATTTATTTACCCAAAAGATCTGCCATCAACATTTGCCCTGCCTGCAACTTTTCTTAGTCTAGGGAGCTTTAGACAAATACAGTCTTACATGACTTCCACAAGAAATCCAATGGTCACAATATTTAAGAGTGATGAAGTTAAAGATTCGTTAAGCCCATACATAGCATCCTTCTCATCAAGAGGTCCAAATCCAAACCCAATTACACCAAACGTTCTCAAGCCCGATATCACTGCTCCAGGAGTTAATGTTCTAGCTGCATGGTCTCCAGTCCATCCAATTTCAGGATTTCTAGGTGACAAAAGACTAGTACAATATAATGTAATATCCGGCACTTCCATGGCTTGTCCTCATGCTGCCGCAGCAGCTGCATATGTCAAATCATTTCACCCCAATTGGTCTCCTGCTATGATCAAGTCTGCATTGATGACTACAGTTACTCCTATGAGTTCTGCTCTTAATCCTGAAGCTGAATTCGCATATGGTGCGGGGCAAATTAATCCTCTTAAGGCAGCAAATCCTGGTTTAGTATATGATATTATCGAAGAAGATTATGTTAAGTTTCTGTGTGGAGAGGGGTATACAGATAAAAAGCTTCGAATTCTTACTAAAGAAAAGAGTAGTTGCAAAGGAAAAGCTAAAAAGAGAGTTGTATACAACTTTAACCTCCCATCATTTGCTCTTTTTGAAAATGCCACATCTTTTAGTCACGTTTTCCGTAGAACAGTTACAAATGTGGGATTGGCAACATCCACGTATAAAGCCAAAGTAATATCTCCATCTTTGTTAGAAATTCAAGTGAAACCAAAAATTTTGTCCTTCACTTCTATAGGGCAGAAAAAGTCATTCTCGGTCATTATTGAAGGGAGATTCAACGTGGATATAATATCTGCTTATTTGATTTGGGATGATGGCAATTTTCGAGTTAGAAGCCCAATTGTGGTGTATGGGGGCCCCCCATAA 4017 0.4145 MDDVVSVFPSTKYNLHTTRSWDFIGFPQQVKRTSLESDIIVGVIDSGIWPESKSFSDKGFGPPPRKWKGTCHNFTCNNKIIGARYFNIEGSFVKTDIKSPRDSNGHGTHCASTVAGNLVNSASLFGYASGTARGGVPSARIAVYKVCWAGCGEADILAAFDAAIADGVDVLSLSLGPTTIVHLPYFQSSINIGSFHAMKRGIFSSNSANNLGPELLSMTNFPPWILSVAASTFGRKFVTKVKLGNGAVYEGSTINTFDLKSKMFPLIYAGDIPNTAGGFNSSVSRFCSKNSVDKHSVKGKIVLCERIQDPREIGFFFGAAGVIFGQVSPKDLSSTFALPATFISLGNLRHIQSYITSTRNPTATIFKSDEVKDSLSPYIVSFSSRGPNPITPNILKPDIAAPGVNVLAAWSQVDPISEFQGDKRLVPYQVISGTSMACPHAAAAAVYVKSFRPNWSPAMIKSAMMTTATQMSSALNPEAEFAYGAGLINPLKAVNPGLVYDISEADYVQFLCGEGYDDKILRILTQDKSSCKGKADKRVVYNLNLPSFSLFENAKSFSHVFRRTVTNVGSATSTYNATIISPSLLQIQVKPNILSFTSIGQKKSFSITIEGKLSVELISASLIWDDGNFQTYIVYMGDHPNGVDPTSLPSVHMAMAQKVLDSDFEPGAILHSYKQSFNGFVMKLTEEEAQRMADMDDVVSVFPSTKYHFHTTRSWDFIGFPQQVKRTSLESDIIVGVIDSGIWPESKSFSDEGFGPPPRKWKGTCHNFTCNNKIIGAKYFNIEGSYEKTDFKSPRDSHGHGTHCASTAAGNLVNSVSLMGYASGTARGGVPSARIAMYKVCWAGCGEADVLAAFDAAIAEGVDVISISIGPSEIVHLPYFQSSINIGSFHAMKRGILTSNSANNLGPQLYTMTNFPPWLLSVAASTFGRKFVTKVKLGNGAVYEGSSINTLDLKKKMFPLIYAGDIPNTAGGFNSSISRFCFKDSVDGHSVKGKIVLCEGLQDPRDVGFFSGAAGIIFGFIYPKDLPSTFALPATFLSLGSFRQIQSYMTSTRNPMVTIFKSDEVKDSLSPYIASFSSRGPNPNPITPNVLKPDITAPGVNVLAAWSPVHPISGFLGDKRLVQYNVISGTSMACPHAAAAAAYVKSFHPNWSPAMIKSALMTTVTPMSSALNPEAEFAYGAGQINPLKAANPGLVYDIIEEDYVKFLCGEGYTDKKLRILTKEKSSCKGKAKKRVVYNFNLPSFALFENATSFSHVFRRTVTNVGLATSTYKAKVISPSLLEIQVKPKILSFTSIGQKKSFSVIIEGRFNVDIISAYLIWDDGNFRVRSPIVVYGGPP* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00894 1338 Pfam Peptidase inhibitor I9 631 710 IPR010259 -
Rops9g00894 1338 ProSitePatterns Serine proteases, subtilase family, serine active site. 433 443 IPR023828 -
Rops9g00894 1338 ProSitePatterns Serine proteases, subtilase family, serine active site. 1129 1139 IPR023828 -
Rops9g00894 1338 FunFam Subtilisin-like protease SBT1.5 732 941 - -
Rops9g00894 1338 CDD PA_subtilisin_like 935 1059 - -
Rops9g00894 1338 Gene3D - 511 636 - -
Rops9g00894 1338 Gene3D - 1207 1335 - -
Rops9g00894 1338 Pfam Fibronectin type-III domain 542 628 IPR041469 -
Rops9g00894 1338 Pfam Fibronectin type-III domain 1238 1333 IPR041469 -
Rops9g00894 1338 CDD PA_subtilisin_like 241 365 - -
Rops9g00894 1338 FunFam Subtilisin-like protease SBT1.5 38 245 - -
Rops9g00894 1338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 632 1333 IPR045051 -
Rops9g00894 1338 CDD Peptidases_S8_3 13 469 IPR034197 -
Rops9g00894 1338 Gene3D Peptidase S8/S53 domain 732 1203 IPR036852 GO:0004252|GO:0006508
Rops9g00894 1338 Pfam Subtilase family 731 1182 IPR000209 GO:0006508|GO:0008236
Rops9g00894 1338 SUPERFAMILY Subtilisin-like 15 498 IPR036852 GO:0004252|GO:0006508
Rops9g00894 1338 Gene3D - 928 1066 - -
Rops9g00894 1338 Gene3D - 234 372 - -
Rops9g00894 1338 Pfam Subtilase family 37 486 IPR000209 GO:0006508|GO:0008236
Rops9g00894 1338 PRINTS Subtilisin serine protease family (S8) signature 36 55 IPR015500 -
Rops9g00894 1338 PRINTS Subtilisin serine protease family (S8) signature 102 115 IPR015500 -
Rops9g00894 1338 PRINTS Subtilisin serine protease family (S8) signature 432 448 IPR015500 -
Rops9g00894 1338 CDD Peptidases_S8_3 707 1163 IPR034197 -
Rops9g00894 1338 Gene3D Peptidase S8/S53 domain 38 507 IPR036852 GO:0004252|GO:0006508
Rops9g00894 1338 ProSiteProfiles Serine proteases, subtilase domain profile. 714 1190 - -
Rops9g00894 1338 SUPERFAMILY Subtilisin-like 709 1194 IPR036852 GO:0004252|GO:0006508
Rops9g00894 1338 ProSitePatterns Serine proteases, subtilase family, histidine active site. 800 810 IPR022398 -
Rops9g00894 1338 ProSitePatterns Serine proteases, subtilase family, histidine active site. 106 116 IPR022398 -
Rops9g00894 1338 ProSiteProfiles Serine proteases, subtilase domain profile. 20 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00894 Rops-Chr9 14615490 14629177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00894 1 627 Subtilisin-like Serine Gene Family AT3G46850 47.671 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00894 - - gmx:100787973 1024.23