Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00880 ATGGTTAAAGGGCGCCAAGGAGAGCGTGTTAGGCTTTACGTCAGAGGTTCAATTCTTGGATACAAGAGGTCCAAGTCAAACCAATACCCAAACACCTCTCTAATCCAGATTGAGGGAGTAAACACCAAGGAAGAGGTTGCATGGTACGCTGGGAAGCGCATGGCTTACATTTATAAAGCCAAGATCAATGGGAGCAAGGGTGAGAGTCTTCATGTATCCAAGCAATATATGAGATTCTCAAGTTCTGTCGGTGCCTATTGA 261 0.4521 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKINGSKGESLHVSKQYMRFSSSVGAY* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00880 86 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 66 IPR001780 GO:0003735|GO:0005840|GO:0006412
Rops9g00880 86 Gene3D translation elongation factor selb, chain A, domain 4 6 84 IPR038661 -
Rops9g00880 86 SUPERFAMILY Translation proteins 12 64 IPR009000 -
Rops9g00880 86 Pfam Ribosomal protein L35Ae 12 69 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00880 Rops-Chr9 14295487 14298688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00880 1 65 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 88.060 7.33e-37 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00880 K02917 - pop:7458094 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00880 9 14295487 14298688 Rops9g00880 9 14295487 14298688 ECH