Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00865 ATGCCTTCTTGTGCGCCCACTTTGCTCTCAAAATGCACCGTCTTCCCAGACCAAAATTCTACTATGGGAAGCCTCAAACTCTCAGTTTCAGACCTTCCTATGCTCTCTTGCCACTACATCCAAAAGGGATGTCTCTTTACAGAACCTTCTGTTCCCTTTCATACTCTCATTCCGCTTCTTAAGTCTGCACTCTCTCGCACTCTTTCCCTCTTTCCACCTCTCGCCGGCCGTCTAACCACCGATTCCGACGGTTATGTTTACCTCACTTGTAACGACGCCGGCGTTGATTTCATTCACGCCATTGCCTCCGGACTCTACATCCGCGACCTTTTGTCCCCTCTCGATGTCCATGAATCCTTCAAGGAATTCTTCACCTTTGACAGGAAAGTTAGTTACAGTGGACATTCCTCGCCGATTTTGGCCGTTCAGGTCACTAAACTCGCCGACGGTGTCTTCATTGGTTGCGCCGTCAATCACGCCGTCACAGACGGAACTTCTTTTTGGAATTTCTTCAACACCTTCGCGCAAGTCTGCAGAGGAGCTAATAAATGCCTCCGGAATGTGCCGGACTTTCACCGCGAGTCAGTCCTGATCTCGAACGCAGTTCTCCGGTTGCCGGAGGGAGGTCCTACGGTGACGTTCAACGCCGACGCGCCGTTGCGTGAGACGATCTTTAGCTTCAGCCGTGAAGCAATTCAGAGGCTGAAAGCCAAAGCCAATAACTGGCAGGAAAACGGCAAGGTCACCGCTGAGTTGATGAAAAAGCAAAGCAACGATCACCACCAGAAGGAGAACGGCAAGGTCGTAACAATACTCGAGAACTTATTCAAGAGCGCGGTTAATTCGAAACCGCAAACAATTACGGCAACCGAAACGGTTGAGATTTCGTCGTTTCAATCAGTTTGCGCGTTGCTCTGGCGCGCCGTGACGCGCGCGAGGAAGTTACCGTCGTCGAAAACGACGACGTTTAGAATGGCAGTGAACTGTCGTCACCGGATAGAACCGAAATTGGAAGCGTACTATTTCGGTAACGCGATTCAGAGCGTTCCGACGTACGCTTCAGCCGGCGACGTGTTGTCTAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACAAAAACGTGAAGGCGCACGATGATGCTATGGTGCGGCGGTTCGTAGAGGATTGGGAAAGTAATCCGAGGTGCTTCCCGCTTGGGAACCCTGACGGTGCATCAATCACCATGGGTAGCTCACCGAGGTTTCCAATGTACGACAACGATTTCGGTTGGGGGAGGCCGTTAGCTGTGAGAAGTGGAAAAGCGAACAAATTCGACGGCAAGATCTCGGCGTTTCCCGGCAGAGATGGAAGCGGCACCGTTGATTTGGAGGTGGTTTTGGCGCCCGAAACCATGGCGGGTCTGGAGTCTGATCTTGAGTTCATGCTTTACGCTTCGAGTCAGTTATGA 1446 0.5194 MPSCAPTLLSKCTVFPDQNSTMGSLKLSVSDLPMLSCHYIQKGCLFTEPSVPFHTLIPLLKSALSRTLSLFPPLAGRLTTDSDGYVYLTCNDAGVDFIHAIASGLYIRDLLSPLDVHESFKEFFTFDRKVSYSGHSSPILAVQVTKLADGVFIGCAVNHAVTDGTSFWNFFNTFAQVCRGANKCLRNVPDFHRESVLISNAVLRLPEGGPTVTFNADAPLRETIFSFSREAIQRLKAKANNWQENGKVTAELMKKQSNDHHQKENGKVVTILENLFKSAVNSKPQTITATETVEISSFQSVCALLWRAVTRARKLPSSKTTTFRMAVNCRHRIEPKLEAYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDDAMVRRFVEDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDLEFMLYASSQL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00865 481 Gene3D - 220 475 IPR023213 -
Rops9g00865 481 Gene3D - 7 205 IPR023213 -
Rops9g00865 481 Pfam Transferase family 8 474 - -
Rops9g00865 481 SUPERFAMILY CoA-dependent acyltransferases 36 180 - -
Rops9g00865 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00865 Rops-Chr9 14108458 14110200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00865 59 471 Monolignol Biosynthesis Gene Families AT5G48930 27.765 1.48e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00865 - - gmx:100779616 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00865 9 14108458 14110200 Rops9g00865 9 14108458 14110200 ECH
Rops11g03991 11 74296631 74298469 Rops9g00865 9 14108458 14110200 PCT