Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00853 ATGGCGGGGAAGGTGTCGAAGGTAGCATACGATGCGAAGATGTGGAAGCTTCTTCGAGAATATAGCCAGGTTCTGGTAGTTTCATCGGATAATGTAGGATCGAACCAGCTTCAAGGTATACGAAGAGCACTTCATGGTGATTCGGTGGTGGTTATGGGGAAGAACTCGTTGATGAAACGCTCTATCATCGAGGATGCTAAGAAAACCGGAAATAACGCTTTCCTTAACCTTGTTCCTCTTCTTGTGGGGAACGTGGCGTTGATTTTCACCAAGGGTGACTTGAGGGAAGTTAGCGAACAAATTGCCAAGTACAAGACTGTTCAACCTATTCTCATGTGCCCTAAATACATGTCATATGATTCATACCGCACTTGTTCCTATATGCAATCTGGACAGTTACCTTTGGGTCTCACATGTTGTAACCAGCAATCTTCTCAGGCTTCTGAGCCTTTTCTTGTATGCTCAAAATTCACGCCACACCAGCATTGTTACTTGATGAGATCGAGACAGTTCTTGATGACGAGTATATGGTCTCCTTTTCTTCTTTTGGCTGGTAACTTGTAA 564 0.4397 MAGKVSKVAYDAKMWKLLREYSQVLVVSSDNVGSNQLQGIRRALHGDSVVVMGKNSLMKRSIIEDAKKTGNNAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKTVQPILMCPKYMSYDSYRTCSYMQSGQLPLGLTCCNQQSSQASEPFLVCSKFTPHQHCYLMRSRQFLMTSIWSPFLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00853 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Rops9g00853 187 Gene3D - 4 123 IPR043141 -
Rops9g00853 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 6 139 - -
Rops9g00853 187 SUPERFAMILY Ribosomal protein L10-like 7 106 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00853 Rops-Chr9 13921327 13922781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00853 7 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 66.990 4.74e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00853 K02941 - jre:108980032 153.68