Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00848 ATGCATCCATGCAACCAACTAACCTACCCTTCATGGCATCGTGATGGCACACCCGAGGAGATTCAAAGCTTCAAACAAGCTTCCGTGAGAGAGGTAGGAAGAAACCATTATTCCCACTTTGATGAGCTTGACGATGAAGCCATGGTTATGGAGATTGCAAAGCTTCAAGGAATGAGTAGAAGATACGAAGCAAAGCCCAAGCATGTTCTCATCACTGTCCACGTTAAGGAGAAAGCGAGATTTTATGTATTCTCTCAAAACCAAAGCAAAAAAGATGGTGCTGGCTCTACTGGCAGCAACTCCTTAAGAGCCCTTGCGTTAATTGGAGCTGGTGTCTCGGGACTTTTGGGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGGCATGTGCAAACTATCCATGGCCTCACGAGGGCATCCTCAGTTCATATGATCATGCTTCGTTTCGTCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGGTTTGGTTGGTGTGGCTTATACAGAAGAGGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGTTGAGATGTTTACGCGTCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAATCAGCTGCTAGGTTTGCCAATGGAGGAGCCTATCCTCCAGATCTAAGCCTTATTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTCGCCCTTCTAACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGATGGACTACACTATAATCCTTATTTTCCTGGTGGGGCCATTGCCATGCCTCAAATGCTTAATGAGGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACTCAAATCATCTGGAGAAGATATGAAGTGCTGGCCACATAG 951 0.4606 MHPCNQLTYPSWHRDGTPEEIQSFKQASVREVGRNHYSHFDELDDEAMVMEIAKLQGMSRRYEAKPKHVLITVHVKEKARFYVFSQNQSKKDGAGSTGSNSLRALALIGAGVSGLLGFATTASADEAEHGLACANYPWPHEGILSSYDHASFRRGHQVYQQVCASCHSMSLISYRGLVGVAYTEEEVKAMAAEIEVVDGPNDEVEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPQMLNEGAVEYEDGTPATQIIWRRYEVLAT* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00848 316 SUPERFAMILY Cytochrome c 131 304 IPR036909 GO:0009055|GO:0020037
Rops9g00848 316 Pfam Cytochrome C1 family 138 304 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 FunFam Cytochrome c1, heme protein 127 310 - -
Rops9g00848 316 Gene3D - 127 306 IPR036909 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 272 283 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 156 175 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 283 302 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 234 258 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 136 155 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PRINTS Cytochrome C1 signature 201 221 IPR002326 GO:0009055|GO:0020037
Rops9g00848 316 PANTHER CYTOCHROME C1 85 304 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00848 Rops-Chr9 13608570 13609750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00848 84 305 Chloroplast and Mitochondria Gene Families AT3G27240 83.784 1.07e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00848 K00413 - gmx:100803087 412.535