Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00838 ATGGCACCTATGCTCACACTAATCTTCTTTTTTGTAATCTTCGTTGTCCTTCTTTTCCTTCACCGGAGCTCCCGTTACCGGCGGTTCCGGTTACCGCCGGGGAGTTTGGGGCTACCCTTTATCGGTGAGACCCTTCAGCTTATATCTGCTTACAAGAGTGACAACCCAGAACCTTTCATGGACCAAAGAGTGAACCGGTACGGTCCAATCTTCACGACCCATGTGTTTGGTGAACCGACCGTGTTCTCTGCTGACCCGGAAACGAACCGGTTCATGCTTTTAAACGAAGGGAAGCTGTTTGATTGTAGTTACCCCGGTTCAATATCGAACCTTCTAGGAAAACACTCTTTGCTTCTCATGAAAGGTGCTCTTCATAAGAGAATGCACTCACTTGTTATGAGCTTTGCAAACTCCACCATCATCAAGGATCATCTTCTGGTCGATATAGACCGGCTCATCCGGCTCAACTTGGATTCTTGGACCGACCGGGTTTTTCTCATGGAAGAGGCAAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGCTAATGAGCTTTGATCCAGGTGAATGGACTGAAACTCTAAGAAAAGAGTACGTTCTTGTGATTGAAGGATTTTTCACACTCCCCATACCTCTCTTCTCTACTACCTACCGGAGAGCCATCAAGGCAAGAACTAAGGTGGCAGAGGCATTAACATTGATTGTGAGGGAGAGAAGAAAAGAGAGCGTAACGGGGGAGAAAAAGAATGACATGTTAGGGGCATTGTTGGCCTCCGGCGACCACTTTTCCGACGAGCAAATAGTGGATTTTCTGTTGGCTTTGCTCGTCGCCGGCTATGAAACCACCTCTACCATTATGACTCTCGCCGTCAAGTTCATCACCGAGACTCCTCTAGCATTGGCACAACTCAAGGAAGAACATGATCAAATCAGGGCAAAGAAGAGCAACCCGGAGGAACCACTGGAGTGGACAGATTATAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAGACTTTGAGGATGGCAAACATAATTGGTGGGATATTTAGGAGAGCAATGACTGACATCAACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTTTTTGCATCATTTCGTGCTGTACATCTAAACCCTGATCATTACAAAGATGCTCGTACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAACAACGAGCCCTGGGAATTTATATACACCATTTGGAGGAGGGCCAAGGCTGTGCCCTGGCTATGAGCTTGCTAGAGTGGTGCTCTCTGTCTTCCTTCACCGCATTGTCACTCGTTACAGTTGGTCCCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTTTCCTATCATAGTGAAGCGTAGAGAGGAGTCCACATCCATGTAA 1425 0.4632 MAPMLTLIFFFVIFVVLLFLHRSSRYRRFRLPPGSLGLPFIGETLQLISAYKSDNPEPFMDQRVNRYGPIFTTHVFGEPTVFSADPETNRFMLLNEGKLFDCSYPGSISNLLGKHSLLLMKGALHKRMHSLVMSFANSTIIKDHLLVDIDRLIRLNLDSWTDRVFLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPIPLFSTTYRRAIKARTKVAEALTLIVRERRKESVTGEKKNDMLGALLASGDHFSDEQIVDFLLALLVAGYETTSTIMTLAVKFITETPLALAQLKEEHDQIRAKKSNPEEPLEWTDYKSMAFTQCVVNETLRMANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHYKDARTFNPWRWQSNSETTSPGNLYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWSPAEEDKLVFFPTTRTQKRFPIIVKRREESTSM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00838 474 PANTHER CYTOCHROME P450 26 29 450 - -
Rops9g00838 474 Gene3D Cytochrome P450 21 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 Pfam Cytochrome P450 208 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 Pfam Cytochrome P450 32 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 CDD CYP90-like 63 467 - -
Rops9g00838 474 SUPERFAMILY Cytochrome P450 25 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Rops9g00838 474 PRINTS E-class P450 group IV signature 402 418 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS E-class P450 group IV signature 329 345 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS E-class P450 group IV signature 58 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS E-class P450 group IV signature 378 396 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 PRINTS E-class P450 group IV signature 418 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00838 474 FunFam Cytochrome P450 90A1 21 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00838 Rops-Chr9 12935952 12941339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00838 120 472 Cytochrome P450 AT5G05690 79.379 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00838 K09588 - gmx:100781291 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00838 9 12935952 12941339 Rops9g00838 9 12935952 12941339 ECH
Rops11g03969 11 73859519 73866625 Rops9g00838 9 12935952 12941339 PCT