Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00832 ATGAAGAAGAATTCACCGTTCTCTGTTATCACCTTCACTCTCACCGTTGTGTTTATCTTCTTTTCTTCAATTCCGTTATGCAATGCTTTCGGCTCCGGCACCACCCTCGCCGTCACCGACGACTCCACCACCGTCTGCGGCGTGGTTTCCGGCGAACCAACGCGGCGCATTGAGTGCTACCATGACGGCCACGTCATCTCCGTGGTGCCCAAGGTCTCATTCTCGTCGATCTCCGGTGGACGGAGCTATTTCTGCGGCCTGAGGTCCGGTAACTACAGTCTCCTCTGTTGGGACACTGTTTCTTCCGATGAAACCTTCGAAAGGAAGAGACTTTATAACAATGGCACTGTTCTATTCGAGAATCTTTCTGTTGGGGATGTTCAAGTTTGTGCCACCACGGTTGGTACCGGAACGGTGTCGTGTTGGAGAACGAATAAAGATTTTAAATTGCCTTCTGGGTCTGATCAATTTTCGATTATAACATCTGGGTCGGGATTCTCTTGTGGAATTTTGAAGAATGGTTCTTGGGTTCGGTGTTGGGGGGATGAGTTTGTTGTTAGAAAGATGGAGAATGAGTTTGGGAACATGTCTATGGTGAGTCTTGTGGCTGGTGAGTCACATGTTTGTGGATTGAATTCAACTGGGTTTATGGTTTGTAAAGGAAGTAACAGTTTTGGTCAAATTGATGTTCCACAAGGTGGGCCTTTGGAGTATTCTGGTTTGGCACTTGGAGCTGAACATAGTTGTGCTATTAGGAGATCCAATGGTTCTGTTATTTGTTGGGGTGGTAGAGGATTGTTTTCTGTTAATGTTACAGAAGGCGTTTCTTTTGAGATCATTGTTTCTGGGTCGAATTTCACTTGTGGATTGACAACAAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGACTAATAGTTCTGATTCTGGTTCAAGTTTTGAGCTTCCTTTGAATCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTGTATATCCTCAATCTCAATCTCTATGTTCTGGTTCTGGCAACATTTGCAAGCCACAGCCTTGTTGGCCTCAAATGCCAGTGCCGGAACCACCGCCGATACCACCGTCACCACTGGTGCGGCTGTCATCTTCAAGGTCAAAGACCTTGACGAGGGGCTTATTGGCATTTGCCATTGTTGGATCAGTGGGAGCTGTTGCTGGTATTTGCACAGTACTTTATTGTTTATGGACTGGTGTTTGTTTTGGGAATAAGAAAATTCACAATTCTGTGCAACCAACAATCACTAGAGGTGGAAGTGTCAATGGTGGGGCTATTTCGAGTAATAGCCCTCCTTCAAGATCATCCACCATTAGGCGTCAGGGTTCAAGGATAATGAGGCGCCAGAGGAGTGGAACCTCATCAAGTAAACATCCAGAACGGGCTGAGGAGTTTACCCTTGCTGAGCTTGTTGCAGCCACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGTTATGGTGTTGTGTATAGAGGCAAACTTTATGATGGCCGTGAAGTGGCAATCAAAAGGGGTGAAACGGCTAGTACTAAGATGAAGGTGTTTCAAGAGAAAGAAAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCCCGTCTTCACCACAAGCACTTAGTTAGGCTAGTTGGGTACTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGTGCATTATATGATCATTTGCATAACAAAAACAATGTGGACAAGAGTAGTAGTGTGTTGAATTCATGGAAAATGAGGATCAAAATTGCATTGGATGCTTCGCGAGGGATCGAATATCTCCATAATTATGCAGTTCCATCTATAATCCATAGAGATATCAAGTCTTCAAACATTCTCCTTGATGCAAATTGGACGGCAAGAGTGTCTGATTTTGGATTATCATTGATGAGTCCAGATTCTGACCATGATTACCGGCCAATGAAGGCAGCAGGAACAGTTGGATACATTGATCCTGAATACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGTCTTGGAGTGGTACTGCTAGAACTATTAACCGGAAAAAGAGCTATATTCAAGAATGGTGAAAATGGAGGCACCCCTGTGAGTGTGGTAGACTTTGCAGTGCCTGCAATTATGGCAGGAGAATTGGCTAAAATTTTGGACCCGAGGGTTGAACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTGGTGGCCTATACTGCAATGCATTGTGTAAATTTGGAAGGTAAAGACAGACCAACAATATCTGATATAGTGGCCAATTTGGAGCGTGCTTTGACTCTCTGTGATAATAGTCATGGCAGCATTTCCAGTGCTACATTCTCTATTGTATCTGACTGA 2406 0.4422 MKKNSPFSVITFTLTVVFIFFSSIPLCNAFGSGTTLAVTDDSTTVCGVVSGEPTRRIECYHDGHVISVVPKVSFSSISGGRSYFCGLRSGNYSLLCWDTVSSDETFERKRLYNNGTVLFENLSVGDVQVCATTVGTGTVSCWRTNKDFKLPSGSDQFSIITSGSGFSCGILKNGSWVRCWGDEFVVRKMENEFGNMSMVSLVAGESHVCGLNSTGFMVCKGSNSFGQIDVPQGGPLEYSGLALGAEHSCAIRRSNGSVICWGGRGLFSVNVTEGVSFEIIVSGSNFTCGLTTNNFSVICWGPGWTNSSDSGSSFELPLNPILPGPCVQSSCSECGVYPQSQSLCSGSGNICKPQPCWPQMPVPEPPPIPPSPLVRLSSSRSKTLTRGLLAFAIVGSVGAVAGICTVLYCLWTGVCFGNKKIHNSVQPTITRGGSVNGGAISSNSPPSRSSTIRRQGSRIMRRQRSGTSSSKHPERAEEFTLAELVAATNNFSLENKIGAGSYGVVYRGKLYDGREVAIKRGETASTKMKVFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYDHLHNKNNVDKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPDSDHDYRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNGENGGTPVSVVDFAVPAIMAGELAKILDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTISDIVANLERALTLCDNSHGSISSATFSIVSD* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00832 801 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Rops9g00832 801 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 195 790 IPR044815 GO:0004674
Rops9g00832 801 SUPERFAMILY Protein kinase-like (PK-like) 469 777 IPR011009 -
Rops9g00832 801 Gene3D Phosphorylase Kinase; domain 1 452 572 - -
Rops9g00832 801 SMART serkin_6 491 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00832 801 Gene3D Transferase(Phosphotransferase) domain 1 573 792 - -
Rops9g00832 801 ProSiteProfiles Protein kinase domain profile. 491 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00832 801 MobiDBLite consensus disorder prediction 427 454 - -
Rops9g00832 801 MobiDBLite consensus disorder prediction 427 475 - -
Rops9g00832 801 FunFam serine/threonine-protein kinase-like protein CCR1 460 572 - -
Rops9g00832 801 SUPERFAMILY RCC1/BLIP-II 29 263 IPR009091 -
Rops9g00832 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Rops9g00832 801 Gene3D - 27 190 IPR009091 -
Rops9g00832 801 Gene3D - 191 351 IPR009091 -
Rops9g00832 801 Pfam Protein kinase domain 492 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00832 801 FunFam Serine/threonine-protein kinase-like protein CCR4 573 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00832 Rops-Chr9 12887141 12889546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00832 8 801 Receptor kinase-like Gene Family AT3G55950 61.239 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops9g00832 Pkinase 7.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00832 - - gmx:100782916 1247.26