Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00830 ATGGCTGTGTCCAACGGTGTCGAAGCTGTGTTAGAGTTTCTGAGGAAGAATGGTTTATCAGAAGCAGAGTCTGCTCTCAGAAAAGACATCATCGAGATGAGTGATCTTGCTTCCTTTGACTATGAGAAGTTCTTCTTCCCCATGGTGCCGCCACCACCTCCGGTCAAAGTCCGATCGTCTTCACGGCCGTCGGAGCTTACTCCCGGTGCCGGAGACTGTTCTAAATCGAGCTCTGCTTCATCTGAGGATCAGTTTGTGAGTATTGGGTCACCTGCTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCCGAATCTTCATCTGATAGATTATCCCAATTCGGCACGGCACGTGATTATCACGATTTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAATTTTGAAGGGCCAGATTTCTTTGGTTGTCATAGTGAAGATAAGTTTGTCATGACAGCAGAATCCGAAAATCAAGATGACAATTCTCTGGTTCTTGATTACAACTATGAAGAATTTCAATTAGAGGGAAATGGTGATTACATGGACAAACCATGCCTTTTTAATCATTCCTCTGTAGGGGGTGGAAATGTGACTTATTCAAAAGGCTATTGTCATGAAGATAACAAAGATCAGTTTGAAGGGGAATTAGAGGGCAAGGCTGAGAAACACACTGTTGCCTATAGTTGTGAGGTTCCACATTACAAAAGCTGTCCAGGTTCAGGAGATTCTTGTAGTGGAGACCCTAATTTGAAGGAAATCTATTTGAATGATTTTCCTTTAAAGGTTGTTACGGATATTAACCCTTTTGATTCTGCTCCGGAGCTTACTGAGAATCAAAGTTTTGACCACTACACTAAAAATGACAGCAGTGAGGGGTACAGGGGTCCCTTTGACTTAACTATTGAAGTTGAAGAAACAGATCTACCAAATGGACTTGACACCTACAAAGCACGAGATGGTAGAATATTTGCTGAAGAGTGCAAAGATCCGGAGATTGCCACAGAAGGAGAGGATGCTACTGATGATGAGCTCTTAAAATACATTCAAGAGGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAACTGCCCATTGTGCTAAATACAGTCCTGGCTGGCAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTCCAGAAGGGAATAGATGTGTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGACCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTAAATAAGCATGACCCAGTAGATAAACACCATATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACCGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAATCAAGAATCTGGAGGGGAAGCATATTTTACAATGAACAGATTGCAGCTCATTACTCGTCAGTGTTTGGAGGCGTTACATTACTTGCATAACTTGGGAATTGTTCATTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGGTGTGAGATAAAAGTTATTGATCTTGGAAGCAGTTGCTTTCAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGACGAAAAGATTGATATATGGTCTCTCGGCTGTATTTTGGCAGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTTATGATTCTCGCGCGCATGATCGGAATGCTTGGTCCTATTGATCTGGGGATGTTGGTAAAAGGGCACGAAACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAACTGGAGTACATAATTCCAGAGGAGTCATCATTGGAGCAACACTTACAGGTTAATGATACTATGTTTATAGACTTTGTGAGATACCTGCTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAAGCACTAAAGCATCCATGGCTTTCATATGTTTACAAGTCCAAGTAA 2157 0.4029 MAVSNGVEAVLEFLRKNGLSEAESALRKDIIEMSDLASFDYEKFFFPMVPPPPPVKVRSSSRPSELTPGAGDCSKSSSASSEDQFVSIGSPASRVSSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPNFEGPDFFGCHSEDKFVMTAESENQDDNSLVLDYNYEEFQLEGNGDYMDKPCLFNHSSVGGGNVTYSKGYCHEDNKDQFEGELEGKAEKHTVAYSCEVPHYKSCPGSGDSCSGDPNLKEIYLNDFPLKVVTDINPFDSAPELTENQSFDHYTKNDSSEGYRGPFDLTIEVEETDLPNGLDTYKARDGRIFAEECKDPEIATEGEDATDDELLKYIQEDEYEVFDLRIIHRKNRTGFEESKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQKGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPVDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTMNRLQLITRQCLEALHYLHNLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLGMLVKGHETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVNDTMFIDFVRYLLSINPKRRPTARQALKHPWLSYVYKSK* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00830 718 Pfam Protein kinase domain 411 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00830 718 CDD PKc_DYRK_like 409 711 - -
Rops9g00830 718 MobiDBLite consensus disorder prediction 54 90 - -
Rops9g00830 718 PANTHER DUAL SPECIFICITY PROTEIN KINASE 110 711 - -
Rops9g00830 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Rops9g00830 718 Gene3D Transferase(Phosphotransferase) domain 1 463 711 - -
Rops9g00830 718 MobiDBLite consensus disorder prediction 104 124 - -
Rops9g00830 718 ProSiteProfiles Protein kinase domain profile. 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00830 718 FunFam Serine/threonine-protein kinase ppk15 488 712 - -
Rops9g00830 718 FunFam Putative serine/threonine-protein kinase dyrk2 403 490 - -
Rops9g00830 718 SMART serkin_6 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00830 718 MobiDBLite consensus disorder prediction 60 90 - -
Rops9g00830 718 SUPERFAMILY Protein kinase-like (PK-like) 398 714 IPR011009 -
Rops9g00830 718 Gene3D Phosphorylase Kinase; domain 1 404 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00830 Rops-Chr9 12854985 12859793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00830 406 706 MAP Kinase Gene Family AT5G19010 31.464 6.75e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Rops9g00830 Pkinase 9.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00830 - - gmx:100783988 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00830 9 12854985 12859793 Rops9g00830 9 12854985 12859793 ECH