Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00815 ATGGGAAGTTCTGTGCGTGTGAAAGAAGCAGTGGTAGTTACTCCTTCTGAGTCTACCCCATCTGTTGTGCTGGCTTTATCAGCTCTTGACTCGCAACTCTTCCTTCGTTTCACCATAGAGTATCTCTTCATTTACAAGGTTTGCCCCAACATGGACCAGGGTGCCACCACGGCTCGTCTTAAAGCAGCGTTAGCCAAAGCACTGGTTCCCTATTACCCATTAGCCGGAAGGGTCAGGGCTAGACCCGATGATGGTTCGTGCCTTGAAGTGGTGTGTGGGGCCCAGGGTGCGGTTTTCATCGAGGCCTTCACTGACCGTTACGGCTCCAACTACTTTGAGAAACCACCTAAAACGGTTACCCACTGGAGGAAATTCTTGTCCCTCCACGTGGCAGATGTTCTCAAGGGATCACCACCGTTGGTTGTTCAGCTGACGTGGCTAGCTGACGGAGCCGCCGCAATTGGCGTCGGAATCAACCACTGCATCTGCGATGGAATTGGTAGCGCGGAGTTTCTAAACTATTTCGCTGAGTTAGCATCTGGGAAAAACGAAGCTTCTAGACCAAAACCTGTTTGGGACCGTCACCTTCTTAACCCGGTGAAACACGGTCGGGTTAACCCAGCGAGTCACCCCGAGTTCAACCGAGTCTCTGACCTCTGCGGCTTCATGAACAAGGTCACCAGCGGGCTTAAACCAACTTCCATTACCTTCGACAAGAAGAGACTCAGCGAGTTAAAAAGACTCGCTCAGTGCACGAGTCAACCTGGCGAGTTGTTTCACACCTCGTTCGAGGTGCTCGCGGCTCACGTATGGAGAAGCTGGGCAAGGGCACTGAGTTTTCCACCGAACCAAATGTTGAAGCTGTTGTTCAGCATCAACGTGCGGAATCGGGTTAAACCGGGTTTACCCGAGGGGTATTATGGGAACGCGTTTGTTTTGGGGTGCGCAGAGACGAAGGCGAAGGAATTGGTGGAAAGGGAAATCGGGTACGGTTCGGGTTTGGTGAAGAAGGCGAAGGAGAGGGTGGGGAATGAGTACGTGAGGGAGGTGACTGAGTTAGTGTCGGAACGAAGAGGGAGTCCTGACTCGGTGGGGGTGCTGATAGTGTCACAATGGTCAAGGTTGGGATTGGAGAATGTTGACGCGGGGATGGGAAAGCCAGTTCATGTGGTTCCCGTTTGCTGTGATAGGTACTGTTTGTTTTTGCCGGTGAGAGAAGAAGAGAGTGTGAGTGTGAAGGTGATGGTGGCTGTCCCCACACCTGCCGTTGACAATTACGAGTTTTTGATGCGAGAGTCGCATCTGTGA 1308 0.5229 MGSSVRVKEAVVVTPSESTPSVVLALSALDSQLFLRFTIEYLFIYKVCPNMDQGATTARLKAALAKALVPYYPLAGRVRARPDDGSCLEVVCGAQGAVFIEAFTDRYGSNYFEKPPKTVTHWRKFLSLHVADVLKGSPPLVVQLTWLADGAAAIGVGINHCICDGIGSAEFLNYFAELASGKNEASRPKPVWDRHLLNPVKHGRVNPASHPEFNRVSDLCGFMNKVTSGLKPTSITFDKKRLSELKRLAQCTSQPGELFHTSFEVLAAHVWRSWARALSFPPNQMLKLLFSINVRNRVKPGLPEGYYGNAFVLGCAETKAKELVEREIGYGSGLVKKAKERVGNEYVREVTELVSERRGSPDSVGVLIVSQWSRLGLENVDAGMGKPVHVVPVCCDRYCLFLPVREEESVSVKVMVAVPTPAVDNYEFLMRESHL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00815 435 Gene3D - 2 215 IPR023213 -
Rops9g00815 435 PANTHER ACYL TRANSFERASE 4 4 424 - -
Rops9g00815 435 Pfam Transferase family 4 421 - -
Rops9g00815 435 Gene3D - 224 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00815 Rops-Chr9 12586785 12588092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00815 5 392 Monolignol Biosynthesis Gene Families AT5G48930 27.407 3.06e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00815 - - gmx:100817048 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00815 9 12586785 12588092 Rops9g00815 9 12586785 12588092 ECH
Rops11g03939 11 73514043 73515344 Rops9g00815 9 12586785 12588092 PCT