Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00810 ATGAGCAAGAACAGGAAACTGAGTCAGCTATGGGATCTTTGTGGAGCTTTGCGCTTTGTTATGGTGTGCTTGTTGTTTCTGAACTTGGGTTTGTGCTGTTCTTTAAATGAAGAAGGTAACGCTCTTTTGAAGTTGAAGCACAGAATAATGAGTGACCCTTTTGGTGCTCTTTCAAATTGGATTGATGATGAAGTTGCTGTTGACCCATGTAATTGGTTCGGAGTTGAATGTTCAGATGGAAGAGTTGTGGTCTTGAATTTGAAAGATCTTTGCCTTGGAGGAACTCTGGGACCAGAGCTTGTGAACCTTATCCACATAAAGTCTATCATCTTGAGAAACAACTCTTTCTCTGGGACCATCCCTGAAGAAATTGTAGATTTGAAAGAATTGGAGATTTTGGATTTGGGATACAACAATTACAGTGGACATCTACCTGCTAATTTTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAATAATGAGCTTCTTGTTGGTTTCTCTCCCGAAATCAATGAAATGAAAATGCTTTCTGAATGTCAAGTAGATGAAAACCAGCTAATCAATGCAGCTAAGATGCCAGCTTGTACAGAAAGATCCATCACATGGCATGCTGGTCAAAATAAAGGTACTCGGAGCCTACTGCAAAATGATCAATCGTATAATCGTCAAGACCCTCATAATCCTGAGGCTAATCCATCTCCTTCAAGTTCTCCATCACCAATGCAGGAGCCAGCTTCCCCTAGTAAAAAAGCTTTTGATTCTCCACCTCCAACCTGGTCTAGATCAGGCTCTGGTTCACCTTCTAAAAGTAACTCATCAAAGAATCATAGAGTTCCTATTTTGGCTGGAGTTATAGGTGGTGCTGTATTTATTCTTATTTCAAGCATTGGTATATATCTTTGTAAAACCAACAAGGTTGCTAATGTCAGACCTTGGGCTACTGGAATAAGTGGACAGCTTCAGAAGGCATTTGTGTCTGGTGTGCCAAAAGTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGTAACGTAATTGGTACTTCACCTATTGGTACATTGTACAAAGGAACTTTGTCTAGTGGTGTTGAAATAGCTGTAGCTTCTGTTTCGGTGACATCATTCAAGAATTGGTCAAAGACTTTAGAAGCTCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATATTGTGAAGAAGATGTGCCATTCACCAGGATGTTAGTTTTTGAATATGCCCCAAACGGAACACTGTTTGAGCACTTACACATAAAAGAAGCTGAGCACTTAGATTGGGGAACAAGACTTAGAGTTGCAGTGGGTATGGCTTATTGCCTGCAACATATGCACCAGTTGGACCCTCCTATGACCCTTATCAACCTGAATTCTTCAGCTATCTACCTGACTGATGATTATGCTGCAAAAATCTCTGATTTGAGTTTCTCAAATGAAATAGCTGCAACTGAGATAAAAGCTGGGGGTAGAAAACACATTGACATGCCATTAGCAAGTCCAGAAAGTAATGTTTATAGCTTTGGAGTTTTATTATATGAAATGGTTACCGGTCGTGTCCCTTATTCGGATAACAGCTCACTTGAAAACTGGGCATCACACTATTTACAAGGGGATCAGCCCCTCAAAGAAATGGTGGATCCAATTCTAGCATCTTACCAAGAGGATCAGCTGGAACAAGTTGCTGAATTGATTAAATCTTGTTGTGTTCATCATGATTCAGAGCAGAGACCAACAATGAAAGAAGTCAGTGAGAGACTGAAAGAGATAACAAAAATAACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTGCAGAACCACGCTGA 1908 0.3988 MSKNRKLSQLWDLCGALRFVMVCLLFLNLGLCCSLNEEGNALLKLKHRIMSDPFGALSNWIDDEVAVDPCNWFGVECSDGRVVVLNLKDLCLGGTLGPELVNLIHIKSIILRNNSFSGTIPEEIVDLKELEILDLGYNNYSGHLPANFGSNISLAILLLDNNELLVGFSPEINEMKMLSECQVDENQLINAAKMPACTERSITWHAGQNKGTRSLLQNDQSYNRQDPHNPEANPSPSSSPSPMQEPASPSKKAFDSPPPTWSRSGSGSPSKSNSSKNHRVPILAGVIGGAVFILISSIGIYLCKTNKVANVRPWATGISGQLQKAFVSGVPKVKRSDLEAACEDFSNVIGTSPIGTLYKGTLSSGVEIAVASVSVTSFKNWSKTLEAQFRKKIDTLSKVNHKNFVNLIGYCEEDVPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVAVGMAYCLQHMHQLDPPMTLINLNSSAIYLTDDYAAKISDLSFSNEIAATEIKAGGRKHIDMPLASPESNVYSFGVLLYEMVTGRVPYSDNSSLENWASHYLQGDQPLKEMVDPILASYQEDQLEQVAELIKSCCVHHDSEQRPTMKEVSERLKEITKITPESAVPKLSPLWWAELEISSAEPR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00810 635 SUPERFAMILY L domain-like 38 191 - -
Rops9g00810 635 MobiDBLite consensus disorder prediction 220 277 - -
Rops9g00810 635 FunFam Nuclear pore complex protein NUP107 35 194 - -
Rops9g00810 635 Gene3D Ribonuclease Inhibitor 33 226 IPR032675 -
Rops9g00810 635 MobiDBLite consensus disorder prediction 255 277 - -
Rops9g00810 635 Gene3D Transferase(Phosphotransferase) domain 1 426 616 - -
Rops9g00810 635 SUPERFAMILY Protein kinase-like (PK-like) 326 604 IPR011009 -
Rops9g00810 635 Pfam Protein tyrosine and serine/threonine kinase 346 604 IPR001245 GO:0004672|GO:0006468
Rops9g00810 635 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Rops9g00810 635 PANTHER PROTEIN MALE DISCOVERER 2 16 632 - -
Rops9g00810 635 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Rops9g00810 635 FunFam Inactive receptor-like serine/threonine-protein kinase 317 425 - -
Rops9g00810 635 ProSiteProfiles Protein kinase domain profile. 343 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00810 Rops-Chr9 12529771 12534820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00810 35 605 Receptor kinase-like Gene Family AT5G16000 26.555 7.72e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops9g00810 PK_Tyr_Ser-Thr 1.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00810 - - gmx:100820416 927.161